Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Solanum_20melongena_20[genbank_20GCA_5F000787875.1_202014-09-30] 33,873 sequences; 833,080,760 total letters Query= NC_005844.1 Length=2742 Score E Sequences producing significant alignments: (Bits) Value seq19028 293 4e-76 >seq19028 Length=31091 Score = 293 bits (324), Expect = 4e-76 Identities = 316/417 (76%), Gaps = 1/417 (0%) Strand=Plus/Plus Query 1576 GTGAGGGTGAAGAATTCTGCATTCTTGAGAGTCCAATTCTTTAGTGCAGCATTCTTTTCC 1635 |||| |||| ||||||||||||| | | || |||||| |||| | | ||| |||||| Sbjct 13777 GTGATGGTGTAGAATTCTGCATTATGCAAAGACCAATTTTTTAATTTAATATTTTTTTCC 13836 Query 1636 TCGTCTATGTACTCTTTATAGCTGGAGTTGGGACCAGGATTGCAGAGGAAGATAGTGGGA 1695 || || | | |||||||||||||||| | |||||||||||||| | |||||| || || Sbjct 13837 TCCTCGAGGAACTCTTTATAGCTGGAAGTAGGACCAGGATTGCACAAGAAGATTGTCGGT 13896 Query 1696 ATTCCTCCTTTAATTTGAACTGGCTTCCCGTACTTCGTGTTGCTTTGCCAGTCCCTTTGG 1755 || || || || || | || ||| | ||||| || ||||| ||| | |||||| Sbjct 13897 ATCCCACCCTTTATCTTTACAGGCCTTCCGTATTTTACCTTGCTGGACCAATTGCTTTGG 13956 Query 1756 GCCCCCATGAACTCTTTAAAATGCTTTAGGTAGTGGGGGTCGACGTCATCAATCACGTTG 1815 |||||||| ||||||||||| |||||||| || || || ||||||| |||||| | ||| Sbjct 13957 GCCCCCATAAACTCTTTAAAGTGCTTTAGATAATGCGGATCGACGTTATCAATGATGTTA 14016 Query 1816 TACCAAGCATCATTACTGTAGACCTTTGGGCTCAGGTCCAGGTGTCCACATAAATAATTG 1875 ||||| |||| ||| || | || ||| || | || || |||| ||||| Sbjct 14017 TACCAGGCATTATTTGAATAAATTTTATTATTCAAATCTAAATGACCGCATAGGTAATTA 14076 Query 1876 TGTGGGCCTAAAGACCTGGCCCACATTGTCTTCCCTGTCCTACTCTCGCCCTCTATGACA 1935 ||||| |||||||| || |||||| |||||||||||| ||| ||| ||||| |||||| Sbjct 14077 TGTGGTCCTAAAGATCTTGCCCACTCTGTCTTCCCTGTTCTAGACTCACCCTCAATGACA 14136 Query 1936 ATACTTTTGGGTC-TCCATGGCCGCGCAGCGGCACTCACAACATTCTCAGCCGCCCA 1991 ||||| ||||||| | ||||||||||||||||| | |||||| ||||| ||||| Sbjct 14137 ATACTCTTGGGTCGTTAATGGCCGCGCAGCGGCATCCCTAACATTTTCAGCTGCCCA 14193 Score = 143 bits (158), Expect = 5e-31 Identities = 264/383 (69%), Gaps = 5/383 (1%) Strand=Plus/Plus Query 940 TCATACTGAGGAATGCTTGTTGTTGTATATGGCATGTACCCATGCCTCGAATCCAGTGTA 999 ||||||||| ||||| | |||||||||| | || ||||| || ||||| || || Sbjct 13083 TCATACTGAA-AATGCAT--TGTTGTATATTAGTTCAACTCATGCATCTAATCCTGTATA 13139 Query 1000 TGCKACTTTGAAAATTCGGATCTATTTCTATGATTCGATACAAAATTAATAAAGATTGAA 1059 | ||| ||| || || | ||||| ||||| || ||||||||||| |||||| Sbjct 13140 TTGTACTATGAGAACACGCAGTTATTTTTATGAGAGTGTATCAAATTAATAAATATTGAA 13199 Query 1060 TTTTATTATACTTGTTTCTTGTACATCAATTGTTCCGACTAATACACCGTACAATACATG 1119 ||||||| | ||| ||||||| | |||| | | |||| | | ||||||| Sbjct 13200 TTTTATTTCATGATATTCAAGTACATCCACTGTTTGCTCAATTACATTGAATAATACATT 13259 Query 1120 AGTAACAGCCCTAATTACATTATTTATTGAAACAATACCCAAATTATCTAAATACTTAAT 1179 ||||| ||||| | ||| || || || || ||| || |||||| | || || Sbjct 13260 GTCTACAGCTCTAATAATATTGTTAATACTAATAACACCTAATCGGTCTAAAAATTTCAT 13319 Query 1180 -ACATTCACTGCTAAAGACTCTTAAGAAACGCGAGGTCTGAGGATGTAAATGAGTCCAAA 1238 ||| | | |||| |||||||||||| | ||| ||||| ||||| |||||| | Sbjct 13320 TACACGAAATT-TAAATACTCTTAAGAAAACGTATGTCGGAGGACGTAAACGAGTCCTGA 13378 Query 1239 TCCGGAAGTCCAGAAAACACTGATGTATCTCCAATGCTTTCCTCAGGTTGTGGTTGAATC 1298 || ||||| || ||| | || | | || | | |||||||||||||||||||||| Sbjct 13379 TCTTGAAGTTGAGGAAAGCTTTGTGAAGATTCAGTTCCTTCCTCAGGTTGTGGTTGAATC 13438 Query 1299 GGATTTGTACATGTATTATGTCG 1321 | ||||||| | ||||||||| Sbjct 13439 GAATTTGTATTTCGATTATGTCG 13461 Lambda K H 0.634 0.408 0.913 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 8662481245144