Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Solanum_20melongena_20[genbank_20GCA_5F000787875.1_202014-09-30] 33,873 sequences; 833,080,760 total letters Query= NC_005845.1 Length=2739 Score E Sequences producing significant alignments: (Bits) Value seq19028 181 2e-42 >seq19028 Length=31091 Score = 181 bits (200), Expect = 2e-42 Identities = 274/387 (71%), Gaps = 7/387 (2%) Strand=Plus/Plus Query 944 GAATCATACTGAAAATGCATTAATGTTGTATATGGCCTGTACTCATGCATCGAACCCTGT 1003 || |||||||||||||||||| ||||||||| | ||||||||||| || ||||| Sbjct 13080 GACTCATACTGAAAATGCATT---GTTGTATATTAGTTCAACTCATGCATCTAATCCTGT 13136 Query 1004 ATACGCGACTTTGAAAATCCGGATCTATTTTTATGATTCGGTAACAAATTAATATATATT 1063 ||| ||| ||| || || | ||||||||||| ||| |||||||||| ||||| Sbjct 13137 ATATTGTACTATGAGAACACGCAGTTATTTTTATGAGAGTGTATCAAATTAATAAATATT 13196 Query 1064 CAATTTCACATCATACGTTATCCA--TACATCAATTGTCTTTTCCAACACATTGTCCAGA 1121 ||||| | |||| | ||| || |||||| | ||| | || | |||||| | Sbjct 13197 GAATTTTATTTCAT--GATATTCAAGTACATCCACTGTTTGCTCAATTACATTGAATAAT 13254 Query 1122 ACATGATAAACAGCTCTTATTACATTGTAAATACTAATCACCCCTAACATGTCCAAGTAC 1181 |||| | |||||||| || | ||||| ||||||||| || ||||| ||| || | Sbjct 13255 ACATTGTCTACAGCTCTAATAATATTGTTAATACTAATAACACCTAATCGGTCTAAAAAT 13314 Query 1182 TTAAGGACTTGGGTTTTAAAGACTCTCAAGAAAATCCCAGTCTGCGGGCGTAAGCCCGTC 1241 || | || | |||||| ||||| ||||||| ||| | || ||||| | ||| Sbjct 13315 TTCATTACACGAAATTTAAATACTCTTAAGAAAACGTATGTCGGAGGACGTAAACGAGTC 13374 Query 1242 CAGATCTGGAACATTAGAACACATTTGTGAAGCCCCAGTGCTTTCCGCAGGTTGTGGTTG 1301 | ||||| ||| | || | | ||||||||| |||| | |||| ||||||||||||| Sbjct 13375 CTGATCTTGAAGTTGAGGAAAGCTTTGTGAAGATTCAGTTCCTTCCTCAGGTTGTGGTTG 13434 Query 1302 AACATGATGTGCACTTTGATTATGTCG 1328 || || || | || |||||||||| Sbjct 13435 AATCGAATTTGTATTTCGATTATGTCG 13461 Score = 172 bits (190), Expect = 9e-40 Identities = 245/340 (72%), Gaps = 6/340 (2%) Strand=Plus/Plus Query 1630 ATTCTTATCTTCATCGAGATACTCTTTATAACTGCTGTTTGGTCCCGGATTGCAGAGGAA 1689 ||| || || || ||||| |||||||||| ||| | || || |||||||| | ||| Sbjct 13827 ATTTTTTTCCTCCTCGAGGAACTCTTTATAGCTGGAAGTAGGACCAGGATTGCACAAGAA 13886 Query 1690 GATGGTGGGAATTCCACCTTTAATCATGACTGGCTTTCCGTACTTCGTGTTGCTTTGCCA 1749 ||| || || || ||||| || ||| | || ||| ||||||| || ||||| ||| Sbjct 13887 GATTGTCGGTATCCCACCCTTTATCTTTACAGGCCTTCCGTATTTTACCTTGCTGGACCA 13946 Query 1750 GTCTCTCTGGGCCCCCATGAATTCTTTAAAATGCTTTAGATAGTGGGGGTCTACGTCATC 1809 | || ||||||||||| || |||||||| ||||||||||| || || || |||| ||| Sbjct 13947 ATTGCTTTGGGCCCCCATAAACTCTTTAAAGTGCTTTAGATAATGCGGATCGACGTTATC 14006 Query 1810 AATGACGTTGTACCAAGCATCATTACTGTACACCTTTGGACTTAAGTC-AAGTGGCCGCA 1868 ||||| ||| ||||| |||| ||| || | || | | || || || || ||||| Sbjct 14007 AATGATGTTATACCAGGCATTATTTGAATAAATTTTATTATTCAAATCTAAATGACCGCA 14066 Query 1869 CAAGTAAT--TGTGTCCCCAAAGAACGCGCCCACGCAGTTTTGCCCGTTCTACTATCACC 1926 | ||||| |||| || ||||| | |||||| | || || || |||||| ||||| Sbjct 14067 TAGGTAATTATGTGGTCCTAAAGATCTTGCCCACTCTGTCTTCCCTGTTCTAGACTCACC 14126 Query 1927 CTCTAAAACTATTCCTATGGGTC--TAATCGGCCGCGCAG 1964 ||| | || || | |||||| |||| |||||||||| Sbjct 14127 CTCAATGACAATACTCTTGGGTCGTTAAT-GGCCGCGCAG 14165 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 8652884700190