Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Solanum_20melongena_20[genbank_20GCA_5F000787875.1_202014-09-30] 33,873 sequences; 833,080,760 total letters Query= NC_005852.1 Length=2575 Score E Sequences producing significant alignments: (Bits) Value seq19028 181 2e-42 >seq19028 Length=31091 Score = 181 bits (200), Expect = 2e-42 Identities = 531/804 (66%), Gaps = 38/804 (5%) Strand=Plus/Plus Query 1527 CCTGGATTGCAAAGCACGATAGCGGGAATTCCACCTTTAATTTGAACAGGCTTTCCATAT 1586 || |||||||| | | ||| | || || ||||| || || | |||||| |||| ||| Sbjct 13870 CCAGGATTGCACAAGAAGATTGTCGGTATCCCACCCTTTATCTTTACAGGCCTTCCGTAT 13929 Query 1587 TTACAGTTGGACTG--CCAGTCTTTCTGGGCCCCAATCAATTCTTTCCAGTGCTTTATTT 1644 || ||| ||| ||| | | |||||||| || || ||||| ||||||||| Sbjct 13930 TTTACCTTG--CTGGACCAATTGCTTTGGGCCCCCATAAACTCTTTAAAGTGCTTTAG-- 13985 Query 1645 TTAAATATTGTGGGTTGACATCATCAATGACGTTATACTCTACATCGTTTGAGTAAACCC 1704 ||| || || | ||| | |||||||| ||||||| ||| ||||| |||| Sbjct 13986 ----ATAATGCGGATCGACGTTATCAATGATGTTATACCAGGCATTATTTGAATAAATTT 14041 Query 1705 TAGAATTGAAATCCATGTGACCACTTAGGTAATTATGAGAACCTAATGCACGTGCCCACA 1764 || ||| ||||| | ||||| | |||||||||||| | ||||| | | ||||||| Sbjct 14042 TATTATTCAAATCTAAATGACCGCATAGGTAATTATGTGGTCCTAAAGATCTTGCCCACT 14101 Query 1765 TTGTTTTCCCTGTTCTAGAATCACCTTCAACGATTAAACTTATAGGTC-TTTCTGGCCGC 1823 ||| |||||||||||||| ||||| |||| || | ||| | |||| || ||||||| Sbjct 14102 CTGTCTTCCCTGTTCTAGACTCACCCTCAATGACAATACTCTTGGGTCGTTAATGGCCGC 14161 Query 1824 GCAGCGGAATCCCTCCCAAAATAATCATCTGCCCATTCTTGCATATCAACTGGAACATTT 1883 ||||||| |||||| || || ||| ||||||| ||| ||| ||| Sbjct 14162 GCAGCGGCATCCCT---AACATTTTCAGCTGCCCA-----GCA-CTCA--------ATTG 14204 Query 1884 ATGAATGACGATAGTCGAAAAGGAGGGACCCATGGTTCAGGAGGTTTACGAAATATTTTG 1943 |||| || || | ||||||| || | ||||||||||| |||| || | Sbjct 14205 TTGAAGGAAGAACAACTAAAAGGACTAACATAAGGTTCAGGAGGGGGCATGAATA-TTCG 14263 Query 1944 GTTGCATTGGCTAAC-AAGTTATGATGTTGAAGAAAGAAGTGTTGC-GGTTGTTCTTCCT 2001 | ||| ||| | ||||||| ||||| | |||| |||| || || ||| Sbjct 14264 ATCTAATTTTGGAACTATATTATGATATTGAA-ATAGAAACTTTGCTGGCATTTTTTCTC 14322 Query 2002 TTATAATCTGCAACGCTTCTTCAGATGACCTAGCATTTAATGCCTTTGCGTATGTGTCAT 2061 | ||||| | |||||||||| ||| ||||| |||| || | ||| || |||| Sbjct 14323 TAATAATAGAAAGCGCTTCTTCAATTGATGTAGCACTTAACGCTTCTGCAGATACATCAT 14382 Query 2062 TAGCAGATTGCTGACCTCCTCTAGCAGATCTTCCGTCGATCTGGAATTCCCCCCATTGAA 2121 | | | || ||||||||||||||||| ||| ||||| || || | ||||| | Sbjct 14383 TTGTTGTATGTGAACCTCCTCTAGCAGATCGTCCATCGATTTGAAAATTGCCCCAGTCGG 14442 Query 2122 TTGTGTCTCCGTCCTTATCAATGTAGGACTTGACATCGGAGCTGGATTTAGCTCCCTGAA 2181 | || | ||| || | ||||| ||| ||||| || |||||||| || | Sbjct 14443 TGTAATCACAGTCTTTCGCGATGTATTTCTTAACATCTGAAGATGATTTAGCGGATTGGA 14502 Query 2182 TGTTCGGATGGAAATGTGTTGACCTGGT-TGGGGA--AACCAGATCGAAGAATCTGTTAT 2238 ||| || ||| ||||| || || || | ||| | | ||||||| ||| | Sbjct 14503 AGTTTGGGTGG-TATGTGGTG--CTAGTATTAGGATGGATGATATCGAAGTGTCTAGGGT 14559 Query 2239 TTTTGCACTGGTACTTGCCTTCGAACTGGATAAGCACATGCAGATGCGGTTCCCCATCTT 2298 || | | || |||||||||||| || ||||| |||| ||| ||||||||| | Sbjct 14560 TTCTAAATTGTGCCTTGCCTTCGAATTGAATAAGGGCATGGCTATGAAATTCCCCATCCT 14619 Query 2299 CATGCAATTCTTTGCACACTTTAA 2322 || ||||| || ||| ||| Sbjct 14620 GGTGTTTTTCTTGACAGACTCTAA 14643 Score = 127 bits (140), Expect = 3e-26 Identities = 258/374 (69%), Gaps = 18/374 (5%) Strand=Plus/Plus Query 820 CACACTGAGAATGCTCTATTATTGTATATGGCATGTACCCATGCGTCTAATCCTGTGTAT 879 || ||||| ||||| ||| |||||||| | || ||||| ||||||||||| ||| Sbjct 13084 CATACTGAAAATGC---ATTGTTGTATATTAGTTCAACTCATGCATCTAATCCTGTATAT 13140 Query 880 GCTACATTAAAAATTCGGATCTATTTTTATGATTCGATAACAAATTAATAAAGTTTGAAT 939 ||| | | || || | ||||||||||| || |||||||||||| |||||| Sbjct 13141 TGTACTATGAGAACACGCAGTTATTTTTATGAGAGTGTATCAAATTAATAAATATTGAAT 13200 Query 940 TTTATTTCATGATCTTCAAGCACAT----GGTTTACATATTTTC--TGTCTGTTGCATAA 993 ||||||||||||| |||||| |||| |||| | | || | || | | ||| Sbjct 13201 TTTATTTCATGATATTCAAGTACATCCACTGTTTGCTCAATTACATTGAATAATACATTG 13260 Query 994 CTAACAGCTCTGATTACATTGTTTATTGAAATAACTCCTAACTGATCTAAATACAACAAG 1053 |||||||| || | |||||| || |||||| ||||| | |||||| | || Sbjct 13261 TCTACAGCTCTAATAATATTGTTAATACTAATAACACCTAATCGGTCTAAAAATTTCATT 13320 Query 1054 ACATAATGTTTGAAT-CTATTTA-AATATGT-CGTCCCAGAAGCTTGAACTGATGTCGTC 1110 ||| | ||| ||| || || | || | || ||| || | | | ||| || ||| Sbjct 13321 ACACGAAATTTAAATACTCTTAAGAAAACGTATGTCGGAGGA-CGTAAAC-GA----GTC 13374 Query 1111 CAGACTTGGAAGTTCAGATAGGCCTTGTGTAGAGTCAATGCCTTCCTCAGGTTGTGGTTG 1170 | || | |||||| || | || ||||| ||| ||| | |||||||||||||||||||| Sbjct 13375 CTGATCTTGAAGTTGAGGAAAGCTTTGTGAAGATTCAGTTCCTTCCTCAGGTTGTGGTTG 13434 Query 1171 AACCTGATTTGGAT 1184 || | ||||| || Sbjct 13435 AATCGAATTTGTAT 13448 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 8128273576038