Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Solanum_20melongena_20[genbank_20GCA_5F000787875.1_202014-09-30] 33,873 sequences; 833,080,760 total letters Query= NC_005855.1 Length=2779 Score E Sequences producing significant alignments: (Bits) Value seq19028 347 2e-92 >seq19028 Length=31091 Score = 347 bits (384), Expect = 2e-92 Identities = 1030/1572 (66%), Gaps = 101/1572 (6%) Strand=Plus/Plus Query 957 GAATCATACTGAGAACGCTCTTTTACTGTATATGGCATGTACTCATGCTTCTAATCCAGT 1016 || ||||||||| || || | || |||||| | |||||||| |||||||| || Sbjct 13080 GACTCATACTGAAAATGCATTGTT---GTATATTAGTTCAACTCATGCATCTAATCCTGT 13136 Query 1017 GTACGCTACTCTTAAAATAAGGGTGTACTTCTACGATTCAATATCGAATTAATAAAATTT 1076 || |||| | | || | | || || || || |||| |||||||||| || Sbjct 13137 ATATTGTACTATGAGAACACGCAGTTATTTTTATGAGAGTGTATCAAATTAATAAATATT 13196 Query 1077 ATATTTTATATCGTGAATCTCGGTTACATTTATTGTGTTTTCAAGTACATTATACAATAC 1136 ||||||| || ||| || ||||| | ||| | |||| |||||| | ||||| Sbjct 13197 GAATTTTATTTCATGATATTCAAGTACATCCACTGTTTGCTCAATTACATTGAATAATAC 13256 Query 1137 ATGATCAACTGCTCTAATTACATTGTTAATGGAAATTACACCAATATTATTTAAATATCT 1196 || || || |||||||| | ||||||||| ||| ||||| | | |||| || | Sbjct 13257 ATTGTCTACAGCTCTAATAATATTGTTAATACTAATAACACCTAATCGGTCTAAAAATTT 13316 Query 1197 AAGAACTTGATATCTAAATACTCTTAAGAAACGACCAGTCTGAGGCCGTAAGGTCGTCCA 1256 | || || || ||||||||||||||||| ||| |||| ||||| |||| Sbjct 13317 CATTACACGAAATTTAAATACTCTTAAGAAAACGTATGTCGGAGGACGTAAACGAGTCCT 13376 Query 1257 GATTCGGAAGTTGAGAAAACATTTGTGAATCCCCAGTACCTTCCTGATATTGTGGCTGAA 1316 ||| ||||||||| ||| |||||||| |||| ||||||| | |||||| |||| Sbjct 13377 GATCTTGAAGTTGAGGAAAGCTTTGTGAAGATTCAGTTCCTTCCTCAGGTTGTGGTTGAA 13436 Query 1317 TCTTATCTGCATGGAAATGATGTCGTGGTTC--ATTAGAAATGGCCTCTCGTTGTGTTCT 1374 || || || || || |||||| || ||| | ||| || ||||| | Sbjct 13437 TCGAATTTGTATTTCGATTATGTCGGTTGTCGAATTTGT--TGGTCTGAGATTGTGGTTG 13494 Query 1375 GTTATCTTGAAATATAGGGGATTGTT--TATCTCCCAGATA------------AAA---- 1416 |||||||||||||| | | | ||| ||||| ||| ||| Sbjct 13495 AGGATCTTGAAATATAGAA-ACAGCTAATATTTCCCAAATATGTGGTTGACGTAAACGAC 13553 Query 1417 ---ACGCCATTCTCTGCTTGATGAGCAGTGATGAGTTCCCCTGTGCGTGAATCCAT-AGT 1472 ||||||||| ||||| |||||||||||| ||||||||||||| |||||| | Sbjct 13554 TAGACGCCATTCATCGCTTGTTGAGCAGTGATGTATTCCCCTGTGCGTATATCCATGACC 13613 Query 1473 TGATGCAGTTGATGTGGAGGTAGTATGAGCAGCCACAATCTAGGTCTACACGCTTACGCC 1532 || ||| | || | | | ||| || |||||| ||||||| || | | | Sbjct 13614 AGAA-CAGCTAATATTTTTGAATATTGAACATCCACAAGGCAGGTCTAGTCGTCTTCTTC 13672 Query 1533 TGATTGGTTGTTTCTTG-------GCTATTT---TGTGTTGG---TCCTTG--------- 1570 ||||| || |||||| | ||| | || | | | |||||| Sbjct 13673 TGATTTGTCTCTTCTTGATATCCGGATATGTAAATGAGGTTGCTTTCCTTGTATAATGTC 13732 Query 1571 ---------ATTGGTA---------CTGGA-GAACAGTGGCTCGTAGAGGGTGACGAAGG 1611 ||||| | ||| | ||| | ||| | || |||| ||| Sbjct 13733 TATGCATCCATTGGGATAACATTTCCTGCACGAATAATGGTTGTGTGATGGTGTAGAATT 13792 Query 1612 TTGCATTCTTGAGAGCCCAATTTTTCAAGGAAATAtttttttCTTCGTCTAGATATTCCT 1671 |||||| | | || ||||||||| || |||||||||||| || || || | || | Sbjct 13793 CTGCATTATGCAAAGACCAATTTTTTAATTTAATATTTTTTTCCTCCTCGAGGAACTCTT 13852 Query 1672 TATATGAGGAGGTAGGTCCTGGATTGCAGAGGAAGATAGTGGGAATTCC-CCCTTTAATT 1730 |||| ||| ||||| || |||||||| | |||||| || || || || ||||||| | Sbjct 13853 TATAGCTGGAAGTAGGACCAGGATTGCACAAGAAGATTGTCGGTATCCCACCCTTTATCT 13912 Query 1731 TGAATGGGCTTCCCATACTTTGTGTTGCTTTGCCAGTCCCTCTGGGCCCCCATGAATTCC 1790 | | || ||||| || ||| ||||| ||| | || ||||||||||| || || Sbjct 13913 TTACAGGCCTTCCG-TATTTTACCTTGCTGGACCAATTGCTTTGGGCCCCCATAAACTCT 13971 Query 1791 TTGAAGTGCTTTAAATAATGCGGGTCTACGTCATCAATGACGTTGTACCACGCATCATTA 1850 || |||||||||| ||||||||| || |||| |||||||| ||| ||||| |||| ||| Sbjct 13972 TTAAAGTGCTTTAGATAATGCGGATCGACGTTATCAATGATGTTATACCAGGCATTATTT 14031 Query 1851 CTGTACACCTTTGGACTTAGGTCTAGATGTCCACATAAATAGTTATGTGGGCCTAGAGAC 1910 || | || | | | |||| ||| || |||| || |||||||| |||| ||| Sbjct 14032 GAATAAATTTTATTATTCAAATCTAAATGACCGCATAGGTAATTATGTGGTCCTAAAGAT 14091 Query 1911 CTAGCCCACATTGTTTTGCCTGTTCTGCTATCACCCTCGATGATAATACTGTTAGGTC-T 1969 || |||||| ||| || |||||||| |||||||| |||| |||||| || |||| | Sbjct 14092 CTTGCCCACTCTGTCTTCCCTGTTCTAGACTCACCCTCAATGACAATACTCTTGGGTCGT 14151 Query 1970 CCATGGCCGCGCAGCGGAAGACATGACGTTCTCGGACACCCATACTTCAAGTTCCTCTGG 2029 ||||||||||||||| | | | || || || | |||| || ||| Sbjct 14152 TAATGGCCGCGCAGCGGCATCCCTAACATTTTCAGCTGCCCA----GCA-----CTC--- 14199 Query 2030 AACTTGATTAAAAGAAGAAGATAAAAAAGGAGAGATATAAGGAGCCGGAGGCTCCTGAAA 2089 | ||| || || |||||| | ||||||| | |||||| | ||||| | || Sbjct 14200 -AATTG-TTGAAGGAAGAACAACTAAAAGGACTAACATAAGGTTCAGGAGGGGGCATGAA 14257 Query 2090 AATTCTATCTAAATTAGAATTTAAATTATGAAACTGTAAAATATAATCTTT--CGGTGCT 2147 |||| |||||| || | | || ||||||| | || ||||| || |||| || | Sbjct 14258 TATTCGATCTAATTTTGGAACTATATTATGATATTG--AAATAGAAACTTTGCTGGCATT 14315 Query 2148 AATTCTTTAATGATTCTAAGAGCCTC-TGACTTACTGCCTGCGTTAAGTGCTGCTGCGTA 2206 |||| |||| || ||| || || | | || || || | | ||| |||| | Sbjct 14316 TTTTCTCTAATAATAGAAAGCGCTTCTTCAATTGATG-TAGCACTTAACGCTTCTGCAGA 14374 Query 2207 AGCGTCATTGGCTGATTGTTGTCCTCCTCTTGCAGATCTTCCATCGATCTGAAACTCACC 2266 | ||||| | || ||| |||||||| ||||||| ||||||||| ||||| | || Sbjct 14375 TACATCATTTGTTGTATGTGAACCTCCTCTAGCAGATCGTCCATCGATTTGAAAATTGCC 14434 Query 2267 CCAATCGATGGTGTCTCCGTCTTTATCGATGTAGGACTTGACATCAGATGAGGATTTAGC 2326 ||| ||| || || | |||||| ||||||| ||| ||||| || || |||||||| Sbjct 14435 CCAGTCGGTGTAATCACAGTCTTTCGCGATGTATTTCTTAACATCTGAAGATGATTTAGC 14494 Query 2327 TCCCTGAATGTTTGGATGGAAATGTGTTGAT-CTACTTGG--GGATGCCAGGTCGAAGAA 2383 || | |||||| ||| ||||| || | || | || ||||| | |||||| Sbjct 14495 GGATTGGAAGTTTGGGTGG-TATGTGGTGCTAGTATTAGGATGGATG--ATATCGAAGTG 14551 Query 2384 TCTGTTATTCGTGCACTGGTACTTGCCTTCGAACTGAACAAGGGCATGCAGATGAGGTTC 2443 ||| || | | || |||||||||||| |||| ||||||||| |||| ||| Sbjct 14552 TCTAGGGTTTCTAAATTGTGCCTTGCCTTCGAATTGAATAAGGGCATGGCTATGAAATTC 14611 Query 2444 CCCATTCTCGTG 2455 ||||| || ||| Sbjct 14612 CCCATCCTGGTG 14623 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 8777546837080