Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Solanum_20melongena_20[genbank_20GCA_5F000787875.1_202014-09-30] 33,873 sequences; 833,080,760 total letters Query= NC_006358.1 Length=2724 Score E Sequences producing significant alignments: (Bits) Value seq19028 154 3e-34 >seq19028 Length=31091 Score = 154 bits (170), Expect = 3e-34 Identities = 244/346 (71%), Gaps = 3/346 (1%) Strand=Plus/Plus Query 1576 TTCTTTTCCTCTTCGAAGAACTCCTTATATGAAGATTGTGGACCAGGATTGCAGAGGAAG 1635 || |||||||| |||| |||||| ||||| || |||||||||||||| | |||| Sbjct 13828 TTTTTTTCCTCCTCGAGGAACTCTTTATAGCTGGAAGTAGGACCAGGATTGCACAAGAAG 13887 Query 1636 ATTGTTGGGATTCCTCCTTTAATTTGAATAGGTTTCCCGTACTTGCAGTTCGATTG-CCA 1694 ||||| || || || || || || | | ||| | ||||| || || | | | ||| Sbjct 13888 ATTGTCGGTATCCCACCCTTTATCTTTACAGGCCTTCCGTATTTTACCTT-GCTGGACCA 13946 Query 1695 GTCTCTCTGGGCCCCCATAAATTCCTTCATATGTTTGAGGAAGTGCGGATCTACGTCATC 1754 | || |||||||||||||| || || | || || || | |||||||| |||| ||| Sbjct 13947 ATTGCTTTGGGCCCCCATAAACTCTTTAAAGTGCTTTAGATAATGCGGATCGACGTTATC 14006 Query 1755 AATGACGTTATACCACGCATTATTAGAGTATACTTTTGGGCTAAGATCCAAATGCCCACA 1814 ||||| ||||||||| |||||||| || || | ||| | | ||| ||||| || || Sbjct 14007 AATGATGTTATACCAGGCATTATTTGAATAAATTTTATTATTCAAATCTAAATGACCGCA 14066 Query 1815 CAGATAATTGTGAGGGCCTAAACTCCTGGCCCATAATGTTTTACCTGTTCTGGATGGGCC 1874 || ||||| || || |||||| || ||||| ||| || |||||||| || || Sbjct 14067 TAGGTAATTATGTGGTCCTAAAGATCTTGCCCACTCTGTCTTCCCTGTTCTAGACTCACC 14126 Query 1875 TTCGATTATTATGGATATAGGTC-TGAAAGGCCGCGCAGCGGAATC 1919 || || | || | |||| | || ||||||||||||| ||| Sbjct 14127 CTCAATGACAATACTCTTGGGTCGTTAATGGCCGCGCAGCGGCATC 14172 Score = 80.6 bits (88), Expect = 5e-12 Identities = 96/130 (74%), Gaps = 3/130 (2%) Strand=Plus/Plus Query 901 GAATCACACGGAGAATGCGTTGTTATTGTATATGGCATGTACTCATGCCTCTAATCCTGT 960 || ||| || || ||||| ||||| |||||| | |||||||| ||||||||||| Sbjct 13080 GACTCATACTGAAAATGCATTGTT---GTATATTAGTTCAACTCATGCATCTAATCCTGT 13136 Query 961 GTATGCAACTTTGAAGATACGGATCTACTTTTATGATTCGATATCTAATTAATAAAGATT 1020 ||| ||| ||| | ||| | || |||||||| |||| |||||||||| ||| Sbjct 13137 ATATTGTACTATGAGAACACGCAGTTATTTTTATGAGAGTGTATCAAATTAATAAATATT 13196 Query 1021 GAATTTTATT 1030 |||||||||| Sbjct 13197 GAATTTTATT 13206 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 8604901975420