Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Solanum_20melongena_20[genbank_20GCA_5F000787875.1_202014-09-30] 33,873 sequences; 833,080,760 total letters Query= NC_006631.1 Length=2747 Score E Sequences producing significant alignments: (Bits) Value seq19028 275 1e-70 >seq19028 Length=31091 Score = 275 bits (304), Expect = 1e-70 Identities = 997/1548 (64%), Gaps = 112/1548 (7%) Strand=Plus/Plus Query 954 CATACTGAAAATGCTTTGTTATTGTATATGGCATGTACCCATGCCTCTAATCCCGTGTAT 1013 |||||||||||||| ||||| |||||| | || ||||| |||||||| || ||| Sbjct 13084 CATACTGAAAATGCATTGTT---GTATATTAGTTCAACTCATGCATCTAATCCTGTATAT 13140 Query 1014 GCTACTTTGAAAGTCAGGAGTTATTTCTATGACTCAGTGACGAATTAATAAATATTAAAT 1073 |||| ||| | | |||||||| ||||| || | |||||||||||||| ||| Sbjct 13141 TGTACTATGAGAACACGCAGTTATTTTTATGAGAGTGTATCAAATTAATAAATATTGAAT 13200 Query 1074 TTTATTTC-TGA-ATCCATGTCTACATACATAGTTTGTTCTAtttttttCCATAATACAT 1131 |||||||| ||| || || || |||| || ||||| || ||| || ||||||||| Sbjct 13201 TTTATTTCATGATATTCAAGT--ACATCCACTGTTTGCTCAATTACATTGAATAATACAT 13258 Query 1132 GATTTACAGCTCTAATAATTGAGTTAATTGAAATTACACCTATATTGTTTAGATACTTGA 1191 | ||||||||||||||| |||||| ||| ||||||| || || | | || | Sbjct 13259 TGTCTACAGCTCTAATAATATTGTTAATACTAATAACACCTAATCGGTCTAAAAATTTCA 13318 Query 1192 GGACTTGGGTTTTGAATACCCTTAAGAAAAGACCAATCTGAGGGTGTAAGGTCGTCCAGA 1251 || | ||| ||||| |||||||||| || |||| |||| |||| || Sbjct 13319 TTACACGAAATTTAAATACTCTTAAGAAAACGTATGTCGGAGGACGTAAACGAGTCCTGA 13378 Query 1252 TTCGGTATGTCAGAAAACACTTGTGCACTCCCAGAGCTCTCCGAAGGTTGTAGTTGAATT 1311 | | | | || ||| ||||| | ||| | ||| ||||||| ||||||| Sbjct 13379 TCTTGAAGTTGAGGAAAGCTTTGTGAAGATTCAGTTCCTTCCTCAGGTTGTGGTTGAATC 13438 Query 1312 GGATCCTTATTGTTATGATGTCCATGTTCATCGTGAATGGACGGT-TGAC---GTGGTTG 1367 | || |||| || ||||| ||| ||| | | | ||| ||| ||||||| Sbjct 13439 GAATTTGTATTTCGATTATGTCG--GTTG-TCGA-ATTTGTTGGTCTGAGATTGTGGTTG 13494 Query 1368 AGGATCTTGAAATAAAGGGG-ATTTGGAACTTCCCAGATAT------------------- 1407 |||||||||||||| || | | | |||||| |||| Sbjct 13495 AGGATCTTGAAATATAGAAACAGCTAATATTTCCCAAATATGTGGTTGACGTAAACGACT 13554 Query 1408 AGGCGCCACTCCATGCTTGAGCTGCAGTGATGGGTTCCCCTGTGCGTAAATCCATGGTTA 1467 || ||||| || ||||| ||||||||| |||||||||||||| ||||||| | Sbjct 13555 AGACGCCATTCATCGCTTGTTGAGCAGTGATGTATTCCCCTGTGCGTATATCCATGACCA 13614 Query 1468 AAGCAGTTGAT--TGACAAATAATAAGAACACCCGCATTCAAGATCTACTC-TCTTCCTC 1524 | ||| | || | |||| | ||||| || || || |||| || ||||| || Sbjct 13615 GAACAGCTAATATTTTTGAATATT--GAACATCCACAAGGCAGGTCTAGTCGTCTTCTTC 13672 Query 1525 CTGTTGCGTCTCTTC---------------------------GCTTCCCTG------TG- 1550 || | |||||||| |||| ||| || Sbjct 13673 -TGATTTGTCTCTTCTTGATATCCGGATATGTAAATGAGGTTGCTTTCCTTGTATAATGT 13731 Query 1551 CTGTACTTTGATTGGAA--------CCTGA--GTACAGTGGTCCTTCGAGGGTGACGAAG 1600 || | | | ||||| | |||| | | | |||| | || |||| ||| Sbjct 13732 CTATGCATCCATTGGGATAACATTTCCTGCACGAATAATGGTTGTGTGATGGTGTAGAAT 13791 Query 1601 ATCGCATTCTTGATAGCCCAGTTTTTGAGTGCGGTGTTCTTGTCCTCGTCGAGGAATTCT 1660 ||||| | | || ||| ||||| | | | || || ||||| |||||||| ||| Sbjct 13792 TCTGCATTATGCAAAGACCAATTTTTTAATTTAATATTTTTTTCCTCCTCGAGGAACTCT 13851 Query 1661 TTATAACTGCTGTTGGGACCAGGATTGCATAGGAAGATTGTCGGTATTCCGCCTTTAATT 1720 ||||| ||| | |||||||||||||| | ||||||||||||||| || || || || Sbjct 13852 TTATAGCTGGAAGTAGGACCAGGATTGCACAAGAAGATTGTCGGTATCCCACCCTTTATC 13911 Query 1721 TGAACTGGCTTCCCGTACTTT---GTGTTGGATTGCCAGTCCCTTTGGGCCCCCATGAAC 1777 | || ||| | ||||| ||| || |||| ||| | |||||||||||||| ||| Sbjct 13912 TTTACAGGCCTTCCGTATTTTACCTTGCTGGA---CCAATTGCTTTGGGCCCCCATAAAC 13968 Query 1778 TCTTTAAAGTGCTTGAGGAAGTGCGGGTTGACGTCATCAATGATGTTATACCAAGCATCA 1837 |||||||||||||| || | ||||| | ||||| |||||||||||||||||| |||| | Sbjct 13969 TCTTTAAAGTGCTTTAGATAATGCGGATCGACGTTATCAATGATGTTATACCAGGCATTA 14028 Query 1838 TTGCTGTACACTTTGGGACTTAAGTCTAGATGGCCACACAAATAGTTGTGTGGGCCTAGC 1897 || || | ||| | | || |||| ||| || || | || || ||||| |||| Sbjct 14029 TTTGAATAAATTTTATTATTCAAATCTAAATGACCGCATAGGTAATTATGTGGTCCTAAA 14088 Query 1898 GACCTAGCCCACATCGTCTTCCCGGTCCGACTATCTCCCTCGATGACTATACTTTGAGGT 1957 || || |||||| |||||||| || | | || ||||| ||||| ||||| | ||| Sbjct 14089 GATCTTGCCCACTCTGTCTTCCCTGTTCTAGACTCACCCTCAATGACAATACTCTTGGGT 14148 Query 1958 C-TAAGGGGCCGCGCAGCGGCATCGACAACATTCTCGCACGCCCACTCTTCAAGTTCTTC 2016 | | | ||||||||||||||||| |||||| || ||||| |||| | | Sbjct 14149 CGTTAATGGCCGCGCAGCGGCATCCCTAACATTTTCAGCTGCCCAGCACTCAATTGTTGA 14208 Query 2017 TGGAACTTGATCAAATGAAGANNNNNNNNNNNGAGAAACATAAGGAGCTGG-TGGCTCTT 2075 |||| || ||| | || || ||||||||| | || || | | Sbjct 14209 AGGAA---GAACAACTAAA-----------AGGACTAACATAAGGTTCAGGAGGGGGCAT 14254 Query 2076 GAAAATACCTATCTAAATTTGAATTTAAATTATGAAATTGAAGTAGAAAGTCTCTTGGGG 2135 ||| || | |||||| |||| | || ||||||| |||||| |||||| | | ||| Sbjct 14255 GAATAT-TCGATCTAATTTTGGAACTATATTATGATATTGAAATAGAAACTTTGCTGGCA 14313 Query 2136 CTTTCTCCTTCAATATATTGAGGGCCTGAGCTTTGGACCCTGCGTTGATTGCCTCGGCAT 2195 ||| || | | ||| || || | | | || || | | || || ||| Sbjct 14314 TTTTTTCTCTAATAATAGAAAGCGCTTCTTCAATTGATGTAGCACTTAACGCTTCTGCAG 14373 Query 2196 ATGCGTCGTTGGCAGTCTGGCAACCTCCTCTAGCTGATCTTCCATCGACTTGGAAAATTC 2255 || | || || | || || ||||||||||||| |||| |||||||| ||| ||| | | Sbjct 14374 ATACATCATTTGTTGTATGTGAACCTCCTCTAGCAGATCGTCCATCGATTTGAAAATTGC 14433 Query 2256 CATGATCAAGGATGTCTCCGTCTTTCTCCACGTAGGTTTTGACATCGCTTGAGCTTTTAG 2315 | || | || | ||||||| | | ||| | || ||||| || ||||| Sbjct 14434 CCCAGTCGGTGTAATCACAGTCTTTCGCGATGTATTTCTTAACATCTGAAGATGATTTAG 14493 Query 2316 CTCCCTGAATGTTTGGATGGAAATGTGCTGACCTGCTTGGGGATG--TGAGGTCGAAGAA 2373 | || | |||||| ||| ||||| || | | | ||||| ||| |||||| Sbjct 14494 CGGATTGGAAGTTTGGGTGG-TATGTGGTG-CTAGTATTAGGATGGATGATATCGAAGTG 14551 Query 2374 TCTATTGTTTCTACACTGGAATTTCCCTTCGAACTGGATGAGAACATG 2421 |||| ||||||| | || || |||||||| || || || |||| Sbjct 14552 TCTAGGGTTTCTAAATTGTGCCTTGCCTTCGAATTGAATAAGGGCATG 14599 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 8678475486734