Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Solanum_20melongena_20[genbank_20GCA_5F000787875.1_202014-09-30] 33,873 sequences; 833,080,760 total letters Query= NC_006876.1 Length=2768 Score E Sequences producing significant alignments: (Bits) Value seq19028 244 2e-61 >seq19028 Length=31091 Score = 244 bits (270), Expect = 2e-61 Identities = 269/357 (75%), Gaps = 1/357 (0%) Strand=Plus/Plus Query 1652 TTCTTTTCCTCGTCTAGGAACTCTTTATACGAGGATGTTGGTCCTGGATTGCAGAGGAAG 1711 || |||||||| || |||||||||||||| ||| || || || |||||||| | |||| Sbjct 13828 TTTTTTTCCTCCTCGAGGAACTCTTTATAGCTGGAAGTAGGACCAGGATTGCACAAGAAG 13887 Query 1712 ATTGTGGGAATCCCGCCTTTTATTTGAATTGGCTTCCCGTACTTCGTGTTGCTTTGCCAG 1771 ||||| || ||||| || ||||| | | ||| | ||||| || ||||| ||| Sbjct 13888 ATTGTCGGTATCCCACCCTTTATCTTTACAGGCCTTCCGTATTTTACCTTGCTGGACCAA 13947 Query 1772 TCCCTTTGTGCCCCCATGAATTCTTTAAAGTGTTTCAGGTAATGCGGATCTACGTCATCA 1831 | ||||| |||||||| || ||||||||||| || || ||||||||||| |||| |||| Sbjct 13948 TTGCTTTGGGCCCCCATAAACTCTTTAAAGTGCTTTAGATAATGCGGATCGACGTTATCA 14007 Query 1832 ATGACGTTGTACCACGCATCATTGCTGTACACCTTTGGGCTGAGGTCAAGATGGCCGCAT 1891 |||| ||| ||||| |||| ||| || | || | | || | ||| |||||| Sbjct 14008 ATGATGTTATACCAGGCATTATTTGAATAAATTTTATTATTCAAATCTAAATGACCGCAT 14067 Query 1892 AGGTAATTATGTGGACCCAATGATCTGGCCCACATTGTCTTCCCGGTTCGACTATCACCT 1951 |||||||||||||| || || ||||| |||||| ||||||||| |||| | ||||| Sbjct 14068 AGGTAATTATGTGGTCCTAAAGATCTTGCCCACTCTGTCTTCCCTGTTCTAGACTCACCC 14127 Query 1952 TCAATCACAATACTAATCGG-CCTCCATGGCCGCGCAGCGGCATCCATGACGTTCTC 2007 ||||| |||||||| | || | | |||||||||||||||||||| | || || || Sbjct 14128 TCAATGACAATACTCTTGGGTCGTTAATGGCCGCGCAGCGGCATCCCTAACATTTTC 14184 Score = 187 bits (206), Expect = 4e-44 Identities = 306/434 (71%), Gaps = 9/434 (2%) Strand=Plus/Plus Query 966 CATACGGAGAATGCTTTGTTGTTGTATATGGCATGTACTCATGCCTCTAACCCAGTGTAT 1025 ||||| || ||||| ||||||| |||| | |||||||| ||||| || || ||| Sbjct 13084 CATACTGAAAATGCATTGTTGT---ATATTAGTTCAACTCATGCATCTAATCCTGTATAT 13140 Query 1026 GCTACTCTTAAGATACGGATCTACTTCTACGATTCGGTCGGCaattaataaatattaaat 1085 |||| | | | ||| | || || || || || |||||||||||||| ||| Sbjct 13141 TGTACTATGAGAACACGCAGTTATTTTTATGAGAGTGTATCAAATTAATAAATATTGAAT 13200 Query 1086 tttatttcatatttttcttcaacttgaattgtttttacaatttt-ttGATACAATACATG 1144 |||||||||| | ||| || | | ||||| ||||| |||| | ||||||| Sbjct 13201 TTTATTTCATGATATTCAAGTACATCCACTGTTTGCTCAATTACATTGA-ATAATACATT 13259 Query 1145 ATCAACTGCTCTAATTACACTGTTAATTGAAATAACCCCTAATCTATCTAAATACTTTAG 1204 || || |||||||| | | ||||||| |||||| ||||||| |||||| | || | Sbjct 13260 GTCTACAGCTCTAATAATATTGTTAATACTAATAACACCTAATCGGTCTAAAAATTTCAT 13319 Query 1205 AACTTGAGTCCTAAATACCCTTAAGAAAAGACCAGTCTGAGGGTGTAAACTCGTCCAGAC 1264 || || ||||||| |||||||||| ||| |||| |||||| |||| || Sbjct 13320 TACACGAAATTTAAATACTCTTAAGAAAACGTATGTCGGAGGACGTAAACGAGTCCTGAT 13379 Query 1265 CCTGAAGTTGAGAAAACATTTGTGAATCCCCAGTTCCTTCCTCAGGTTGTGGTTGAATCG 1324 | |||||||||| ||| |||||||| |||||||||||||||||||||||||||||| Sbjct 13380 CTTGAAGTTGAGGAAAGCTTTGTGAAGATTCAGTTCCTTCCTCAGGTTGTGGTTGAATCG 13439 Query 1325 TATCTGGACTGATATGATGTCG--TGGGGCATGTTGAATGGCCGGTTCACGTGGTCGATG 1382 || || | | || |||||| || | || ||| ||| | | ||||| || | Sbjct 13440 AATTTGTATTTCGATTATGTCGGTTGTCGAAT-TTG-TTGGTCTGAGATTGTGGTTGAGG 13497 Query 1383 ATCTTGAAATACAG 1396 ||||||||||| || Sbjct 13498 ATCTTGAAATATAG 13511 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 8742359878185