Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Solanum_20melongena_20[genbank_20GCA_5F000787875.1_202014-09-30] 33,873 sequences; 833,080,760 total letters Query= NC_006995.1 Length=2746 Score E Sequences producing significant alignments: (Bits) Value seq19028 423 3e-115 >seq19028 Length=31091 Score = 423 bits (468), Expect = 3e-115 Identities = 1042/1574 (66%), Gaps = 106/1574 (7%) Strand=Plus/Plus Query 961 TCATACTGAAAATGCTGTATTGTTGTATATGGCATGTACTCATGCATCTAATCCTGTGTA 1020 ||||||||||||||| |||||||||||| | |||||||||||||||||||| || Sbjct 13083 TCATACTGAAAATGC---ATTGTTGTATATTAGTTCAACTCATGCATCTAATCCTGTATA 13139 Query 1021 TGCTACTTTAAAAATAAGAATCTATTTCTATGATTCTACAATGAATTAATAAATATTAAA 1080 | |||| | | || | | | ||||| ||||| | | |||||||||||||| || Sbjct 13140 TTGTACTATGAGAACACGCAGTTATTTTTATGAGAGTGTATCAAATTAATAAATATTGAA 13199 Query 1081 TTTTATTTCATGTTCTTCAACTACATCAATTGTTTTGTCTAATACATCATATAATACATG 1140 |||||||||||| | ||||| |||||| | ||||| || | ||||| ||||||||| Sbjct 13200 TTTTATTTCATGATATTCAAGTACATCCACTGTTTGCTCAATTACATTGAATAATACATT 13259 Query 1141 ACCAAATGCTCTAATACAGTTGTTAATACTAATAACACCTAAAGAATCTAAATACTTAAT 1200 | | ||||||||| ||||||||||||||||||||||| |||||| | || || Sbjct 13260 GTCTACAGCTCTAATAATATTGTTAATACTAATAACACCTAATCGGTCTAAAAATTTCAT 13319 Query 1201 CACTTGGGTTTTAAATACCCTCAAGAAATGCGATGTCTGAGGTTGTAAGGCTGTGAATAT 1260 || | ||||||||| || |||||| ||||| |||| |||| || || Sbjct 13320 TACACGAAATTTAAATACTCTTAAGAAAACGTATGTCGGAGGACGTAAACGAGTCCTGAT 13379 Query 1261 CCTCAAGTTGAGATAACATTTGTGAATCCCCAACGCCTTCCTGAGGTTGTGGTTGAACCG 1320 | | |||||||| || |||||||| || ||||||| |||||||||||||| || Sbjct 13380 CTTGAAGTTGAGGAAAGCTTTGTGAAGATTCAGTTCCTTCCTCAGGTTGTGGTTGAATCG 13439 Query 1321 TATTTGGATATGGATAATGTCGTGGTTTTCG--TTGAATGGCCGCCGTTGGTGGTTGAGG 1378 ||||| || | ||| ||||| |||| ||| || ||| | | | |||||||||| Sbjct 13440 AATTTGTATTTCGATTATGTC--GGTTGTCGAATTTGTTGGTCTGAGATTGTGGTTGAGG 13497 Query 1379 ATCTTGAAATATAG-GGGATTTATGATTTCCCAGGTATGT-------------------A 1418 |||||||||||||| | || |||||||| ||||| | Sbjct 13498 ATCTTGAAATATAGAAACAGCTAATATTTCCCAAATATGTGGTTGACGTAAACGACTAGA 13557 Query 1419 CGCCATTCATTGCTTGAGCTGCAGTGATGGACTCCCCTGTGCGTAAATCCATGATGTTCG 1478 |||||||||| ||||| ||||||||| | ||||||||||||| |||||||| Sbjct 13558 CGCCATTCATCGCTTGTTGAGCAGTGATGTATTCCCCTGTGCGTATATCCATGACCAGAA 13617 Query 1479 CAGTTTATTGTTCTGTATATGGAACACCCACACGGTAGATCAATTC-TCTTCCTGCGAAT 1537 ||| | || || || |||| ||||| ||||| || || || | || ||||| | || | Sbjct 13618 CAGCTAATATTTTTGAATATTGAACATCCACAAGGCAGGTCTAGTCGTCTTCTTCTGATT 13677 Query 1538 TG--GTTTCTTG---GCCTG-TTTGTGAATCA-----CTTT------------------- 1567 || |||||| || | | ||| ||| | |||| Sbjct 13678 TGTCTCTTCTTGATATCCGGATATGTAAATGAGGTTGCTTTCCTTGTATAATGTCTATGC 13737 Query 1568 ---GATGGGTGTAA----------------AGTGGTTCTGTGAGAATGATGAAGGTTGCA 1608 || || ||| | ||||| ||||| || ||| |||| Sbjct 13738 ATCCATTGGGATAACATTTCCTGCACGAATAATGGTTGTGTGATGGTGTAGAATTCTGCA 13797 Query 1609 TTTTTTAATGCCCACTCCTTTAAAGCACTGTTTTTATCCTCTTCCAAGAATTCTATATAT 1668 || | || | ||| | ||||| | | ||||| ||||| || | ||| ||| |||| Sbjct 13798 TTATGCAAAGACCAATTTTTTAATTTAATATTTTTTTCCTCCTCGAGGAACTCTTTATAG 13857 Query 1669 GATGAAGTAGGTCCTGGATTGCAGAGGAAGATAGTGGGAATTCCACCTTTAATTTGAATT 1728 |||||||| || |||||||| | |||||| || || || ||||| || || | | Sbjct 13858 CTGGAAGTAGGACCAGGATTGCACAAGAAGATTGTCGGTATCCCACCCTTTATCTTTACA 13917 Query 1729 GGCTTTCCGTATTTTGTATTTGACTG--CCAGTCCCTTTGGGCCCCCATGAATTCTTTAA 1786 ||| |||||||||| || | ||| ||| | |||||||||||||| || ||||||| Sbjct 13918 GGCCTTCCGTATTT--TACCTTGCTGGACCAATTGCTTTGGGCCCCCATAAACTCTTTAA 13975 Query 1787 AGTGCTTTAGGTAGTGGGGATCAACGTCATCGATGACGTTGTACCAGGCGCTGTTCGAAT 1846 |||||||||| || || ||||| |||| ||| |||| ||| |||||||| | || |||| Sbjct 13976 AGTGCTTTAGATAATGCGGATCGACGTTATCAATGATGTTATACCAGGCATTATTTGAAT 14035 Query 1847 ATACCTTGGGGCTTAAGTCTAGGTGTCCACATAAGTAATTGTGTGGCCCCAGAGACCTGG 1906 | | || | || |||| || || |||| |||||| ||||| || | ||| || | Sbjct 14036 AAATTTTATTATTCAAATCTAAATGACCGCATAGGTAATTATGTGGTCCTAAAGATCTTG 14095 Query 1907 CCCACGCGGTCTTACCTGTACGACTATCACCTTCGATCACGATACTTTTAGGTC-TCCAC 1965 ||||| | ||||| ||||| | | ||||| || || || ||||| || |||| | | Sbjct 14096 CCCACTCTGTCTTCCCTGTTCTAGACTCACCCTCAATGACAATACTCTTGGGTCGTTAAT 14155 Query 1966 GGCCGCGCAGCGGTGTCTCTTACATTTTCTGATACCCAATCCTTTAGTTCATCTGGGACT 2025 ||||||||||||| || || |||||||| | | |||| | ||| || | Sbjct 14156 GGCCGCGCAGCGGCATCCCTAACATTTTCAGCTGCCCAGCAC------TCAATTG----T 14205 Query 2026 TGAGTGAATGTTGAATTATGAAAAGGAGAAACATATACCTCTGATGGAGGCTTGAAGATC 2085 ||| ||| ||| | ||||||| |||||| || | || ||| |||| || Sbjct 14206 TGAAGGAA----GAACAACTAAAAGGACTAACATAAGGTTCAGGAGGGGGCATGAATATT 14261 Query 2086 CTATCTAGATTATTATTTAGGTTATGAAATTGTAAAACATAGTCCTTTGGGACTAGTTCT 2145 | ||||| || | || |||||| |||| || | | | | ||| | | |||| Sbjct 14262 CGATCTAATTTTGGAACTATATTATGATATTGAAATAGAAACTTTGCTGGCATTTTTTCT 14321 Query 2146 TTAATAATCTCAAGAGCCTCATGCTTACTTCCCGCGTTAATTGCCTGGGCGTAAGCATCG 2205 ||||||| ||| || || | | | || | | || | || | |||| Sbjct 14322 CTAATAATAGAAAGCGCTTCTTCAATTGATGTAGCACTTAACGCTTCTGCAGATACATCA 14381 Query 2206 TTTGTAGATTGTAGACCCCCTCTTGCAGATCGTCCGTCGATCTGAAATTCTCCCCATTCG 2265 ||||| | ||| ||| ||||| ||||||||||| ||||| ||||| | ||||| ||| Sbjct 14382 TTTGTTGTATGTGAACCTCCTCTAGCAGATCGTCCATCGATTTGAAAATTGCCCCAGTCG 14441 Query 2266 ATTGTGTCACCGTCCTTGTCCAGATAGGACTTGACGTCGGAGCTTGATTTAGCTCCCTGA 2325 | |||| ||| || | | || ||| || || || ||||||||| || Sbjct 14442 GTGTAATCACAGTCTTTCGCGATGTATTTCTTAACATCTGAAGATGATTTAGCGGATTGG 14501 Query 2326 ATATTTGGATGGAAATGTGTTGACCTGGT-TGGGGA--GACCATGTCGAAGAATCT-GTT 2381 | ||||| ||| ||||| || || || | ||| || || |||||| ||| | Sbjct 14502 AAGTTTGGGTGG-TATGTGGTG--CTAGTATTAGGATGGATGATATCGAAGTGTCTAGGG 14558 Query 2382 ATTCGAGCATTTGT-ATTTCCCCTCGAATTGCATAAGCACGTGGAGATGAGGGCTCCCAT 2440 ||| | | |||| || || |||||||| ||||| | ||| |||| ||||| Sbjct 14559 TTTCTA--AATTGTGCCTTGCCTTCGAATTGAATAAGGGCATGGCTATGAAATTCCCCAT 14616 Query 2441 CCTCGTGTAATTCT 2454 ||| |||| |||| Sbjct 14617 CCTGGTGTTTTTCT 14630 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 8675276638416