Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Solanum_20melongena_20[genbank_20GCA_5F000787875.1_202014-09-30] 33,873 sequences; 833,080,760 total letters Query= NC_007210.2 Length=2758 Score E Sequences producing significant alignments: (Bits) Value seq19028 459 5e-126 >seq19028 Length=31091 Score = 459 bits (508), Expect = 5e-126 Identities = 697/979 (71%), Gaps = 25/979 (3%) Strand=Plus/Plus Query 1658 ATTCTTATCCTCGTCGAGATATTCCTTATATGATGATGTCGGTCCCAGGATTGCATAGGA 1717 ||| || ||||| ||||| | || ||||| || || || || ||||||||| | || Sbjct 13827 ATTTTTTTCCTCCTCGAGGAACTCTTTATAGCTGGAAGTAGGACC-AGGATTGCACAAGA 13885 Query 1718 AGATTGTCGGAATGCC-CCCTTTAATTTGAATGGGCTTGCCGTACTTGGTGTTGCTTTGC 1776 |||||||||| || || ||||||| || | || ||| ||||| || ||||| | Sbjct 13886 AGATTGTCGGTATCCCACCCTTTATCTTTACAGGCCTT-CCGTATTTTACCTTGCTGGAC 13944 Query 1777 CAATCCCGTTGGGCCCCCATGAATTCCTTAAAGTGCTTTAGATAGTGGGGGTCAACATCA 1836 |||| | |||||||||||| || || ||||||||||||||||| || || || || | | Sbjct 13945 CAATTGCTTTGGGCCCCCATAAACTCTTTAAAGTGCTTTAGATAATGCGGATCGACGTTA 14004 Query 1837 TCGATGACGTTATACCATGCGTCATTTGAGTAGATCTTGGGGCTCAAGTCTAGATGCCCA 1896 || |||| ||||||||| || | |||||| || || || |||| |||| ||| || Sbjct 14005 TCAATGATGTTATACCAGGCATTATTTGAATAAATTTTATTATTCAAATCTAAATGACCG 14064 Query 1897 CAAAGGTAATTATGTGGGCCTAGTGATCTGGCCCACATTGTCTTCCCAGTTCTACTCTCT 1956 || |||||||||||||| |||| ||||| |||||| ||||||||| |||||| ||| Sbjct 14065 CATAGGTAATTATGTGGTCCTAAAGATCTTGCCCACTCTGTCTTCCCTGTTCTAGACTCA 14124 Query 1957 CCCTCTACTACTATACTGACCGGTCGCCAA-GGCCGCGCAGCGGCATCCCTGACATTCTC 2015 ||||| | || ||||| ||||| || |||||||||||||||||||| ||||| || Sbjct 14125 CCCTCAATGACAATACTCTTGGGTCGTTAATGGCCGCGCAGCGGCATCCCTAACATTTTC 14184 Query 2016 CTCCGCCCAACATTCAAGTTCTTCCGGAACTTGATCGAATGAAGAAGCTAAAAAAGGAGA 2075 | ||||| || |||| | |||| ||| ||| || |||||| ||| Sbjct 14185 AGCTGCCCAGCACTCAATTG----------TTGAAGGAA-GAACAA-CTAAAA--GGACT 14230 Query 2076 AACAAAAACCTCTGCAGGAGGTGCAAAAATCCTATCTAAATTAGAATTTAAATTGTGAAA 2135 |||| || || | ||| || || || | |||||| || | | || ||| ||| | Sbjct 14231 AACATAAGGTTCAGGAGGGGGCATGAATATTCGATCTAATTTTGGAACTATATTATGATA 14290 Query 2136 CTGAAATATATATTCTTTAGGTAATTTTTCTCTAATAATAGATAAAGCAGCTTCCTTTGA 2195 ||||||| | | | | || | |||||||||||||||||| | || |||| |||| Sbjct 14291 TTGAAATAGAAACTTTGCTGGCATTTTTTCTCTAATAATAGAAAGCGCTTCTTCAATTGA 14350 Query 2196 ACCTGCATTCAGCGCTTCTGCTGCTGCATCATTAGCCGTCTGCTGACCTCCTCTAGCAGA 2255 ||| | | ||||||||| | | ||||||| | || || ||||||||||||||| Sbjct 14351 TGTAGCACTTAACGCTTCTGCAGATACATCATTTGTTGTATGTGAACCTCCTCTAGCAGA 14410 Query 2256 TCTTCCGTCGACTTGAAAAACACCCCAGTCGACGTAATCACCGTCCTTCTCGATATAGGA 2315 || ||| |||| ||||||| ||||||||| |||||||| ||| ||| |||| || Sbjct 14411 TCGTCCATCGATTTGAAAATTGCCCCAGTCGGTGTAATCACAGTCTTTCGCGATGTATTT 14470 Query 2316 CTTGACATCAGAACTGGACTTGGCTCCTTGGAAGTTCGGATGGAATTGTGAGGAGGTGTT 2375 ||| ||||| ||| || || || ||||||||| || ||| || | | || || Sbjct 14471 CTTAACATCTGAAGATGATTTAGCGGATTGGAAGTTTGGGTGGTATGTGGTGCTAGTATT 14530 Query 2376 GGGATGCGTAATGTCAAAATGCCTGGGGTTCCTGAATTGGGCTTTACCTTTGAATTGGAT 2435 ||||| | || || || || || ||||| || ||||| || || |||| |||||| || Sbjct 14531 AGGATGGATGATATCGAAGTGTCTAGGGTTTCTAAATTGTGCCTTGCCTTCGAATTGAAT 14590 Query 2436 GAGGGCATGGAGATGCAGTGTCCCATCGGAGTGTTTCTCTTGAGCTACTCTGATGAATAA 2495 ||||||||| ||| | | |||||| |||||| |||||| ||||| | || | Sbjct 14591 AAGGGCATGGCTATGAAATTCCCCATCCTGGTGTTTTTCTTGACAGACTCTAA--AACAG 14648 Query 2496 TTTATCGGATGGGCAGTGAATAGCCTTTATAA--GCTCTAGTGCCTCTTCTTTGGGAATA 2553 ||||| || || || ||| | | || || |||||| | ||||| |||| | Sbjct 14649 TTTATTTGAAGGACA-AGAA-ACCTGTTTCAAGTGCTCTAAGATTTGATCTTTAGGAAGA 14706 Query 2554 GGGCATTTGGGATAAGTGAGAAATATGTTTTTGGCTTTTATTTGGAATGAACGAGGACGA 2613 || ||||| ||| | || |||||||||||||| | |||| ||||||||| || | | Sbjct 14707 GGACATTTTGGAAATGTAAGAAATATGTTTTTAGAATTTACCTGGAATGAATGAAGCCTT 14766 Query 2614 GGCATGTTG-AGAACTGAA 2631 ||||| ||| |||| |||| Sbjct 14767 GGCATTTTGTAGAAATGAA 14785 Score = 145 bits (160), Expect = 1e-31 Identities = 253/363 (70%), Gaps = 9/363 (2%) Strand=Plus/Plus Query 969 GAATCACACTGAGAACGCATTAATATTGTATATGGCATGTACTCATGCCTCTAACCCCGT 1028 || ||| ||||| || ||||| |||||||| | |||||||| ||||| || || Sbjct 13080 GACTCATACTGAAAATGCATTG---TTGTATATTAGTTCAACTCATGCATCTAATCCTGT 13136 Query 1029 GTATGCTACACTGAAGATCCGCATCTACTTCTATGATTCAGTCCAGAATTAATAAAGATT 1088 ||| ||| ||| | |||| || || ||||| || |||||||||| ||| Sbjct 13137 ATATTGTACTATGAGAACACGCAGTTATTTTTATGAGAGTGTATCAAATTAATAAATATT 13196 Query 1089 ATATTTTATTATATGTG--TCAATTGAGCATCAATTGTGCCCTCCAGTACATCATACAGT 1146 |||||||| ||| |||| | |||| | ||| ||| | ||||| | | | Sbjct 13197 GAATTTTATTTCATGATATTCAAGTA--CATCCACTGTTTGCTCAATTACATTGAATAAT 13254 Query 1147 ACATGATTTATAGCCCTAATTACATTGTTGACACTAATAATGCCTAATTTATCTAAGTAC 1206 |||| | || ||| ||||| | |||||| | |||||||| |||||| ||||| | Sbjct 13255 ACATTGTCTACAGCTCTAATAATATTGTTAATACTAATAACACCTAATCGGTCTAAAAAT 13314 Query 1207 TGCAT-ACATTGAACTTTAAATACTCTTGAGAAACGCCCAGTCTGAGGACGTAAACGAGT 1265 | ||| ||| ||| ||||||||||||| ||||| ||| |||||||||||||||| Sbjct 13315 TTCATTACAC-GAAATTTAAATACTCTTAAGAAAACGTATGTCGGAGGACGTAAACGAGT 13373 Query 1266 CCAGATCTGGCAGATCAGGAAACACTGGTGCATCCCCAGTGCTTTCCTCAGGTTGTAGTT 1325 || ||||| | || | |||||| | ||| | |||| | ||||||||||||| ||| Sbjct 13374 CCTGATCTTGAAGTTGAGGAAAGCTTTGTGAAGATTCAGTTCCTTCCTCAGGTTGTGGTT 13433 Query 1326 GAA 1328 ||| Sbjct 13434 GAA 13436 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 8713662818232