Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Solanum_20melongena_20[genbank_20GCA_5F000787875.1_202014-09-30] 33,873 sequences; 833,080,760 total letters Query= NC_007211.1 Length=2745 Score E Sequences producing significant alignments: (Bits) Value seq19028 289 5e-75 >seq19028 Length=31091 Score = 289 bits (320), Expect = 5e-75 Identities = 606/889 (68%), Gaps = 33/889 (4%) Strand=Plus/Plus Query 1610 TGATGGTGACGAAGGTCGCATTCTTTATGGCCCAGTTTTTTAGACCTATGTTTTTCTCCT 1669 |||||||| ||| ||||| | | | ||| ||||||| || ||||| |||| Sbjct 13778 TGATGGTGTAGAATTCTGCATTATGCAAAGACCAATTTTTTAATTTAATATTTTTTTCCT 13837 Query 1670 CATCAAGGAACTCTTTATAGGAGGATGTTGGACCAGGATTGCAGAGGAAGATTGTTGGGA 1729 | || ||||||||||||||| ||| || |||||||||||||| | ||||||||| || | Sbjct 13838 CCTCGAGGAACTCTTTATAGCTGGAAGTAGGACCAGGATTGCACAAGAAGATTGTCGGTA 13897 Query 1730 TCCCGCCTTTAATTTGAACGGGCTTCCCGTATTTTGTATTGGACTG--CCAATCCCTTTG 1787 |||| || || || | || ||| | ||||||||| ||| ||| ||||| ||||| Sbjct 13898 TCCCACCCTTTATCTTTACAGGCCTTCCGTATTTTACCTTG--CTGGACCAATTGCTTTG 13955 Query 1788 GGCCCCCATGAATTCCTTGAAATGTTTTACATAGTGAGGATCAACATCGTCTATTATGTT 1847 ||||||||| || || || || || |||| ||| || ||||| || | || || ||||| Sbjct 13956 GGCCCCCATAAACTCTTTAAAGTGCTTTAGATAATGCGGATCGACGTTATCAATGATGTT 14015 Query 1848 ATACCAGGCTTCGTTGCTGTAAACCCTAGGACTAAGGTCAATATGACCGCATAAGTAATT 1907 ||||||||| | || |||| || | | | || | ||||||||||| |||||| Sbjct 14016 ATACCAGGCATTATTTGAATAAATTTTATTATTCAAATCTAAATGACCGCATAGGTAATT 14075 Query 1908 ATGTGGACCTAATGATCTAGCCCACATGGTTTTCCCAGTCCTGCTGTCACCTTCTATAAC 1967 |||||| ||||| ||||| |||||| || ||||| || || ||||| || || || Sbjct 14076 ATGTGGTCCTAAAGATCTTGCCCACTCTGTCTTCCCTGTTCTAGACTCACCCTCAATGAC 14135 Query 1968 TATACTTATTGGTC-TCCATGGCCGCGCAGCGGCAGACATTACATTGTCTGCGGCCCATT 2026 ||||| | |||| | ||||||||||||||||| | | ||||| || || ||||| Sbjct 14136 AATACTCTTGGGTCGTTAATGGCCGCGCAGCGGCATCCCTAACATTTTCAGCTGCCCA-- 14193 Query 2027 CTTCAATCTCTTCAGGGACTTGATCAAACGATGAACAATTAAATGGACTAATGTACTCTT 2086 || || | ||| | || || |||||| |||| ||||||| || || Sbjct 14194 --GCACTC---------AATTG-TTGAAGGAAGAACAACTAAAAGGACTAACATAAGGTT 14241 Query 2087 CAATAGGAGGCATGAAAATGCGTTCCAGATTAGCATTTAAATTATGAAATTGTAATACAT 2146 || ||| |||||||| || || || | || | | || ||||||| |||| |||| | Sbjct 14242 CAGGAGGGGGCATGAATATTCGATCTAATTTTGGAACTATATTATGATATTGAAATAGAA 14301 Query 2147 AGTCCTTAGGAGCTAACTCCTTAATTACATCAAGAGCTTGATCCTTATTGCCTGTGTTAA 2206 | | || | || |||| | | ||| |||| || |||| ||| | Sbjct 14302 ACTTTGCTGGCATTTTTTCTCTAATAATAGAAAGCGCTTCTTC--AATTG-ATGTAGCAC 14358 Query 2207 TT---GCTCTTGCGTAAGCATCGTTTGCTGTCTGTTGTCCCCCTCTTGCAGATCTTCCAT 2263 || ||| ||| | |||| |||| ||| ||| || ||||| ||||||| ||||| Sbjct 14359 TTAACGCTTCTGCAGATACATCATTTGTTGTATGTGAACCTCCTCTAGCAGATCGTCCAT 14418 Query 2264 CAATCTGGAAGGTGCCCCAGTC-AAGTATGTCCCCGTCCTTCTCGATGTATGCCTTAACG 2322 | || || || |||||||||| ||| || | ||| ||| |||||||| |||||| Sbjct 14419 CGATTTGAAAATTGCCCCAGTCGGTGTA-ATCACAGTCTTTCGCGATGTATTTCTTAACA 14477 Query 2323 TCTGAACTGGACTTAGC--ATCGGTGATGAAGCAGTGGTAT-TGGGAGGAGGAGTTGGGT 2379 |||||| || ||||| || | || | ||||||| ||| || | | || | Sbjct 14478 TCTGAAGATGATTTAGCGGATTG--GAAGTTTGGGTGGTATGTGGTGCTAGTATTAGGAT 14535 Query 2380 GACTGTAAGTCGAAGAATCTCGGATTCGTGAGGTCGAACTTGCCCTCGAATTGCACAAGA 2439 | || | |||||| ||| || || | | | |||||| |||||||| | ||| Sbjct 14536 GGATG-ATATCGAAGTGTCTAGGGTTTCTAAATTGTGCCTTGCCTTCGAATTGAATAAGG 14594 Query 2440 GCATGGAGATGAGGGTTTCCATCCTCGTGTAGTTCTCTACAAACCCTAA 2488 |||||| |||| | ||||||| |||| |||| ||| || |||| Sbjct 14595 GCATGGCTATGAAATTCCCCATCCTGGTGTTTTTCTTGACAGACTCTAA 14643 Score = 174 bits (192), Expect = 3e-40 Identities = 364/535 (68%), Gaps = 33/535 (6%) Strand=Plus/Plus Query 976 TCATACTGAGAATGCCTTAGTTTTGTATATGGCTTGTACTCATGCTAGCAATCCTGTGTA 1035 ||||||||| ||||| || |||||||| || |||||||| |||||||| || Sbjct 13083 TCATACTGAAAATGCATTG---TTGTATATTAGTTCAACTCATGCATCTAATCCTGTATA 13139 Query 1036 TGCTACGCTGAAAATTAGAATATATTTCTACGACTCTGTAATGAATTAATAAATATTGAA 1095 | ||| ||| || | | ||||| || || |||| ||||||||||||||||| Sbjct 13140 TTGTACTATGAGAACACGCAGTTATTTTTATGAGAGTGTATCAAATTAATAAATATTGAA 13199 Query 1096 TTTTATTATATG--ATTGAAGTTTACATACAACGTATTGTGCAA-TGCATTCCATAGTAC 1152 ||||||| ||| ||| ||| ||||| || || ||| ||| | |||| ||| ||| Sbjct 13200 TTTTATTTCATGATATTCAAG--TACATCCACTGT-TTGCTCAATTACATTGAATAATAC 13256 Query 1153 ATGATTTATTGCTCTAATTACATTGTTAAGACAAATTACACCAAGATTATCTAAATACTT 1212 || | || |||||||| | |||||||| || ||| ||||| | |||||| | || Sbjct 13257 ATTGTCTACAGCTCTAATAATATTGTTAATACTAATAACACCTAATCGGTCTAAAAATTT 13316 Query 1213 CATAACTTGGGTCTTAAAGACCCTTAAGAAACTCAATGTCTGAGGTTGTAAGCGAGTCCA 1272 ||| || | ||||| || ||||||||| ||||| |||| |||| ||||||| Sbjct 13317 CATTACACGAAATTTAAATACTCTTAAGAAAACGTATGTCGGAGGACGTAAACGAGTCCT 13376 Query 1273 GATCTGGCAAGTCAGAAAACATTTGTGTATCCCCAAAGCCTTCCGCAGGTTGTAGTTGAA 1332 ||||| | | | || ||| |||||| | || |||||| |||||||| |||||| Sbjct 13377 GATCTTGAAGTTGAGGAAAGCTTTGTGAAGATTCAGTTCCTTCCTCAGGTTGTGGTTGAA 13436 Query 1333 CTGTATCTGAACTGTAATGATGTCGTGTTCCCGTA-GGAATGGTCTGCTGTCGTGTTTGA 1391 | || || | | || |||||| ||| || | ||||||| | ||| |||| Sbjct 13437 TCGAATTTGTATTTCGATTATGTCG-GTTGTCGAATTTGTTGGTCTGAGATTGTGGTTGA 13495 Query 1392 TGATCTTGAAATATAGGGGATTGGT--TATTTCCCA-------GGT------------AT 1430 |||||||||||||| | | | | ||||||||| ||| | Sbjct 13496 GGATCTTGAAATATA-GAAACAGCTAATATTTCCCAAATATGTGGTTGACGTAAACGACT 13554 Query 1431 ACACGCCATTCTCTGCCTGAGCTGCAGTGATGTATTCCCCTGTGCGTGAATCCAT 1485 | ||||||||| || || |||||||||||||||||||||||| |||||| Sbjct 13555 AGACGCCATTCATCGCTTGTTGAGCAGTGATGTATTCCCCTGTGCGTATATCCAT 13609 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 8672077790098