Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Solanum_20melongena_20[genbank_20GCA_5F000787875.1_202014-09-30] 33,873 sequences; 833,080,760 total letters Query= NC_007290.1 Length=2751 Score E Sequences producing significant alignments: (Bits) Value seq19028 228 1e-56 >seq19028 Length=31091 Score = 228 bits (252), Expect = 1e-56 Identities = 258/343 (75%), Gaps = 7/343 (2%) Strand=Plus/Plus Query 1648 TTCCTCGTCGAGAAATTCTTTATAACTGCTGTTGGGACCTGGATTGCAGAGGAAGATTGT 1707 |||||| ||||| || |||||||| ||| | ||||| |||||||| | ||||||||| Sbjct 13833 TTCCTCCTCGAGGAACTCTTTATAGCTGGAAGTAGGACCAGGATTGCACAAGAAGATTGT 13892 Query 1708 CGGTATCCCGCCTTTAATTTGAACTGGCTTCCCGTACTTT---GTGTTGGATTGCCAGTC 1764 ||||||||| || || || | || ||| | ||||| ||| || |||| ||| | Sbjct 13893 CGGTATCCCACCCTTTATCTTTACAGGCCTTCCGTATTTTACCTTGCTGGA---CCAATT 13949 Query 1765 CCTTTGGGCCCCCATGAACTCCTTAAAGTGCTTGAGGAAATGCGGATCGACGTCATCAAT 1824 |||||||||||||| ||||| ||||||||||| || ||||||||||||||| |||||| Sbjct 13950 GCTTTGGGCCCCCATAAACTCTTTAAAGTGCTTTAGATAATGCGGATCGACGTTATCAAT 14009 Query 1825 GACGTTATACCAGGCGTCGTTATTGTAGACCTTGGGACTCAGGTCCAGATGTCCGCATAA 1884 || |||||||||||| | || || | || | ||| || | ||| ||||||| Sbjct 14010 GATGTTATACCAGGCATTATTTGAATAAATTTTATTATTCAAATCTAAATGACCGCATAG 14069 Query 1885 ATAGTTATGTGGTCCCAGTGATCTGGCCCACATCGTCTTCCCCGTTCGACTATCTCCCTC 1944 || ||||||||||| | ||||| |||||| |||||||| |||| | || ||||| Sbjct 14070 GTAATTATGTGGTCCTAAAGATCTTGCCCACTCTGTCTTCCCTGTTCTAGACTCACCCTC 14129 Query 1945 AATTACTATACTTCGAGGTC-TAAGGGGCCGCGCAGCGGCATC 1986 ||| || ||||| |||| | | ||||||||||||||||| Sbjct 14130 AATGACAATACTCTTGGGTCGTTAATGGCCGCGCAGCGGCATC 14172 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 8691270880006