Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Solanum_20melongena_20[genbank_20GCA_5F000787875.1_202014-09-30] 33,873 sequences; 833,080,760 total letters Query= NC_007339.1 Length=2736 Score E Sequences producing significant alignments: (Bits) Value seq19028 194 3e-46 >seq19028 Length=31091 Score = 194 bits (214), Expect = 3e-46 Identities = 464/692 (67%), Gaps = 35/692 (5%) Strand=Plus/Plus Query 1631 ATTCTTTTCTTCATCGAGATATTCTTTGTAACTGCTGTTTGGTCCTTTATTGCAGAGGAA 1690 ||| ||||| || ||||| | ||||| || ||| | || || |||||| | ||| Sbjct 13827 ATTTTTTTCCTCCTCGAGGAACTCTTTATAGCTGGAAGTAGGACCAGGATTGCACAAGAA 13886 Query 1691 GATGGTGGGAATCCCACCTTTAATCATGACTGGCTTTCCGTACTTCGTGTTGCTTTGCCA 1750 ||| || || |||||||| || ||| | || ||| ||||||| || ||||| ||| Sbjct 13887 GATTGTCGGTATCCCACCCTTTATCTTTACAGGCCTTCCGTATTTTACCTTGCTGGACCA 13946 Query 1751 GTCTCTTTGGGCCCCCATGAATTCTTTAAAATGCTTTAGATAGTGGGGATCAACGTCATC 1810 | |||||||||||||| || |||||||| ||||||||||| || ||||| |||| ||| Sbjct 13947 ATTGCTTTGGGCCCCCATAAACTCTTTAAAGTGCTTTAGATAATGCGGATCGACGTTATC 14006 Query 1811 AATGACGTTGTACCAAGCATCATTATTGTATACTCTCGGGCTTAGATCTAGATGGCCGCA 1870 ||||| ||| ||||| |||| ||| || | | | | | ||||| ||| ||||| Sbjct 14007 AATGATGTTATACCAGGCATTATTTGAATAAATTTTATTATTCAAATCTAAATGACCGCA 14066 Query 1871 CAAGTAATTGTGTGGTCCTAACGAACGCGCCCACGCTGTTTTGCCCGTCCTACTATCACC 1930 | |||||| ||||||||||| || | |||||| |||| || || || ||| ||||| Sbjct 14067 TAGGTAATTATGTGGTCCTAAAGATCTTGCCCACTCTGTCTTCCCTGTTCTAGACTCACC 14126 Query 1931 CTCTAATACTATTCCTATGGGTC--TATTCGGGCGCGCAGCGCAACACCCCACATTACTT 1988 ||| | || || | |||||| || | || ||||||||| | || ||||| || Sbjct 14127 CTCAATGACAATACTCTTGGGTCGTTAAT-GGCCGCGCAGCGGCATCCCTAACATT--TT 14183 Query 1989 GAAACCCAATCGACGAGTTCTTGCGGAACTCTGTCGAAGGATGAAATTGAAAAAGGAGAA 2048 || | | || || || ||| |||||| ||| ||||||| | Sbjct 14184 ------CAGCTGCCCAGCACT----CAA--TTGTTGAAGGAAGAACAACTAAAAGGACTA 14231 Query 2049 ACATACACCTCAGCACGAGGTGGAAAAATACGATCTAAATTCGAATTCATATTATGAAAT 2108 ||||| |||| | | || || || |||||||| || | | ||||||||| || Sbjct 14232 ACATAAGGTTCAGGAGGGGGCATGAATATTCGATCTAATTTTGGAACTATATTATGATAT 14291 Query 2109 TGCAAAACGTAATCTTTGGGTGCTAATTCTTTCAACACT--TTCAATGCATCTTCTTTGT 2166 || ||| || ||||| || ||| |||| | | | || || |||||| Sbjct 14292 TG--AAATAGAAACTTTGCTGGC--ATTTTTTCTCTAATAATAGAAAGC-GCTTCTTCAA 14346 Query 2167 TTCCTGT---ATTTATTGCTCTTGCGTACGCGTCGTTAGCTGTTTGTTGACCTCCACGAG 2223 || ||| | ||| ||| ||| | | || || | ||| ||| |||||| | || Sbjct 14347 TTGATGTAGCACTTAACGCTTCTGCAGATACATCATTTGTTGTATGTGAACCTCCTCTAG 14406 Query 2224 CAGATCGTCCATCGATCTGGAAGACACCCCATTC----TAACACGTCCCCGTCTTTGTCG 2279 |||||||||||||||| || || ||||| || ||| || | |||||| || Sbjct 14407 CAGATCGTCCATCGATTTGAAAATTGCCCCAGTCGGTGTAA----TCACAGTCTTTCGCG 14462 Query 2280 ATGTATTGTTTGACGTCCGATGCCGATTTAGC 2311 ||||||| || || || || | |||||||| Sbjct 14463 ATGTATTTCTTAACATCTGAAGATGATTTAGC 14494 Score = 141 bits (156), Expect = 2e-30 Identities = 250/362 (69%), Gaps = 7/362 (2%) Strand=Plus/Plus Query 945 GAATCATACTGAAAATGCATTAATGTTGTATATGGCCTGTACTCACGCATCGAACCCTGT 1004 || |||||||||||||||||| ||||||||| | ||||| ||||| || ||||| Sbjct 13080 GACTCATACTGAAAATGCATT---GTTGTATATTAGTTCAACTCATGCATCTAATCCTGT 13136 Query 1005 ATACGCGACTTTGAAAATCCGAATCTATTTTTATGATTCGGTAACAAATTAATATATATT 1064 ||| ||| ||| || || | ||||||||||| ||| |||||||||| ||||| Sbjct 13137 ATATTGTACTATGAGAACACGCAGTTATTTTTATGAGAGTGTATCAAATTAATAAATATT 13196 Query 1065 CAATTTCACATCATATGTTGTCCA--TACATCAATTGTCTTTTCCAATACATCGTCCAAT 1122 ||||| | || ||| | | || |||||| | ||| | || | ||||| | ||| Sbjct 13197 GAATTTTATTTC--ATGATATTCAAGTACATCCACTGTTTGCTCAATTACATTGAATAAT 13254 Query 1123 ACATGATAAACTGCTCTTATTACATTATAAATACCAATCACTCCTAACCTATCCAGGTAC 1182 |||| | || ||||| || | ||| | ||||| ||| || ||||| | || | | Sbjct 13255 ACATTGTCTACAGCTCTAATAATATTGTTAATACTAATAACACCTAATCGGTCTAAAAAT 13314 Query 1183 TTAAGGACCTGGGTTTTAAAGACTCTCAAGAAAATCCCAGTCGGCGGTTGTAAGCCCGTC 1242 || | || | |||||| ||||| ||||||| ||||| || |||| | ||| Sbjct 13315 TTCATTACACGAAATTTAAATACTCTTAAGAAAACGTATGTCGGAGGACGTAAACGAGTC 13374 Query 1243 CAGATTTGGAAAGTTATCGCACATTTGTGAAGCCGCAGTGCTTTCCGCAGGTTGTGGTTG 1302 | ||| | ||| | | | ||||||||| |||| | |||| ||||||||||||| Sbjct 13375 CTGATCTTGAAGTTGAGGAAAGCTTTGTGAAGATTCAGTTCCTTCCTCAGGTTGTGGTTG 13434 Query 1303 AA 1304 || Sbjct 13435 AA 13436 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 8643288155236