Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Solanum_20melongena_20[genbank_20GCA_5F000787875.1_202014-09-30] 33,873 sequences; 833,080,760 total letters Query= NC_007638.1 Length=2757 Score E Sequences producing significant alignments: (Bits) Value seq19028 223 6e-55 >seq19028 Length=31091 Score = 223 bits (246), Expect = 6e-55 Identities = 502/746 (67%), Gaps = 25/746 (3%) Strand=Plus/Plus Query 1589 AATGGCTCTGTGAGGGTGACGAACGACGCATTTTTTAAAGCCCACGTCTTTAAAGCGGAA 1648 ||||| | ||||| |||| ||| ||||| | |||| ||| | ||||| | Sbjct 13768 AATGGTTGTGTGATGGTGTAGAATTCTGCATTATGCAAAGACCAATTTTTTAATTTAATA 13827 Query 1649 TTCTTTTCCTCGTCCAGGTACTCTTTATAGCTGGAATTGGGCCCTGGATTGCAAAGGAAG 1708 || |||||||| || ||| ||||||||||||||||| | || || |||||||| | |||| Sbjct 13828 TTTTTTTCCTCCTCGAGGAACTCTTTATAGCTGGAAGTAGGACCAGGATTGCACAAGAAG 13887 Query 1709 ATTGTTGGGATCCCGCCTTTAATTTGAACTGGCTTGCCGTACTTGGTATTGCTTTGCCAG 1768 ||||| || ||||| || || || | || ||| | ||||| || ||||| ||| Sbjct 13888 ATTGTCGGTATCCCACCCTTTATCTTTACAGGCCTTCCGTATTTTACCTTGCTGGACCAA 13947 Query 1769 TCCCTCTGGGCCCCCATAAACTCTTTAAAGTGTTTGAGAAAATGGGGATCAACGTCATCG 1828 | || |||||||||||||||||||||||||| || ||| |||| ||||| |||| ||| Sbjct 13948 TTGCTTTGGGCCCCCATAAACTCTTTAAAGTGCTTTAGATAATGCGGATCGACGTTATCA 14007 Query 1829 ATGACGTTGTACCATGCGTCGTTGCTGTACACCTTTGGGCTTAGGTCTAGATGCCCACAC 1888 |||| ||| ||||| || | || || | || | | |||| ||| || || Sbjct 14008 ATGATGTTATACCAGGCATTATTTGAATAAATTTTATTATTCAAATCTAAATGACCGCAT 14067 Query 1889 AAGTAATTATGTGGACCTAATGACCTGGCCCACATCGTCTTCCCTGTTCTACTGTCACCT 1948 | |||||||||||| ||||| || || |||||| ||||||||||||||| ||||| Sbjct 14068 AGGTAATTATGTGGTCCTAAAGATCTTGCCCACTCTGTCTTCCCTGTTCTAGACTCACCC 14127 Query 1949 TCTACCACTAAACTTAAGGGTC-TCAGAGGCCGCGCAGCGGCCGCCACTACATTCTCGCA 2007 || | || | ||| ||||| | | |||||||||||||| || ||||| || Sbjct 14128 TCAATGACAATACTCTTGGGTCGTTAATGGCCGCGCAGCGGCATCCCTAACATTTTCAGC 14187 Query 2008 CGCCCACTCTTCGAGTTCTTCCGGAACTCGATCAAAAGAAGAGACAGAAAAAGGAGAAAC 2067 ||||| || | || || || ||||| | ||||||| ||| Sbjct 14188 TGCCCAGCACTC-AATTGTT-------------GAAGGAAGAACAACTAAAAGGACTAAC 14233 Query 2068 ATAAACCTCCATTGGAGGTGTAAAAATCCTATCTAAGTTAGCATTTAAATTATGAAATTG 2127 |||| || || || | || || | |||||| || | | || ||||||| |||| Sbjct 14234 ATAAGGTTCAGGAGGGGGCATGAATATTCGATCTAATTTTGGAACTATATTATGATATTG 14293 Query 2128 TAAAACATAATCTTTAGGGGC--TAGTTCCCTAAGTACTCTAAGAGC-CTCCGGC--TTA 2182 ||| | || |||| ||| | ||| |||| || | || ||| || | | || Sbjct 14294 --AAATAGAAACTTTGCTGGCATTTTTTCTCTAA-TAATAGAA-AGCGCTTCTTCAATTG 14349 Query 2183 CTGCCTGTGTTAAGTGCTGCGGCGTAAGCGTCGTTGGCTGTCTGTTGTCCCCCTCTGGCA 2242 || |||| ||| | || | | || || | ||| ||| || ||||| ||| Sbjct 14350 ATGTAGCACTTAA-CGCTTCTGCAGATACATCATTTGTTGTATGTGAACCTCCTCTAGCA 14408 Query 2243 GATCTTCCGTCGATCTGAAACTCTCCCCATTCGATGGTGTCGCCGTCCTTGTCGATGTAG 2302 |||| ||| ||||| ||||| | ||||| ||| || || | ||| || ||||||| Sbjct 14409 GATCGTCCATCGATTTGAAAATTGCCCCAGTCGGTGTAATCACAGTCTTTCGCGATGTAT 14468 Query 2303 GACTTGACATCTGAGCTTGATTTAGC 2328 ||| |||||||| ||||||||| Sbjct 14469 TTCTTAACATCTGAAGATGATTTAGC 14494 Score = 161 bits (178), Expect = 2e-36 Identities = 359/538 (67%), Gaps = 33/538 (6%) Strand=Plus/Plus Query 957 CATACTGAGAATGCTTTGCTCTTGTACATGGCATGTACGCATGCCTCTAATCCTGTGTAT 1016 |||||||| ||||| ||| ||||| || | || ||||| ||||||||||| ||| Sbjct 13084 CATACTGAAAATGCATTG---TTGTATATTAGTTCAACTCATGCATCTAATCCTGTATAT 13140 Query 1017 GCTACTTTGAAATGTAGGAGTTATTTCTACGATACTGTAACGAATTAAGATTAATAAAGG 1076 |||| ||| | | |||||||| || || | |||| | |||||| | |||| Sbjct 13141 TGTACTATGAGAACACGCAGTTATTTTTATGAGAGTGTATCAAATTAATA--AATA---- 13194 Query 1077 TTGAATTTTATTGACTCAGTTTGTTGCACCTGAATTGTGCCTTGAATTACATTGTATAAT 1136 |||||||||||| | | || | || | | ||| | |||||||||| ||||| Sbjct 13195 TTGAATTTTATTTCATGATATTCAAGTACATCCACTGTTTGCTCAATTACATTGAATAAT 13254 Query 1137 ACATGATCAAAAGCCCTAATTACATTATTAATACTAATAACTCCTAATCTATCTAAGTAC 1196 |||| || | ||| ||||| | ||| |||||||||||||| ||||||| ||||| | Sbjct 13255 ACATTGTCTACAGCTCTAATAATATTGTTAATACTAATAACACCTAATCGGTCTAAAAAT 13314 Query 1197 CCAAGAACTTGATTGCGTAAGACCCTCAAGAAACGCCATGTCTGAGGATGTAAACGAGTC 1256 | || || || || || |||||| ||||| ||||| ||||||||||| Sbjct 13315 TTCATTACACGAAATTTAAATACTCTTAAGAAAACGTATGTCGGAGGACGTAAACGAGTC 13374 Query 1257 CAGATCCGGAAGGTTATGAAACATTTGTGAATCCCCAAGGCTTTCCTCAGGTTGTGGTTG 1316 | |||| |||| | | |||| |||||||| || | |||||||||||||||||| Sbjct 13375 CTGATCTTGAAGTTGAGGAAAGCTTTGTGAAGATTCAGTTCCTTCCTCAGGTTGTGGTTG 13434 Query 1317 AACCTCACTTGGACGGTTATGATGTCGTGGTTGCGGA--GGAACGGCCTGTCCAGGTGGT 1374 || | | ||| | || ||||| ||||| || || ||| ||||| Sbjct 13435 AATCGAATTTGTATTTCGATTATGTC--GGTTGTCGAATTTGTTGGTCTGAGATTGTGGT 13492 Query 1375 CTAGGATCTTGAAATACAG--------GGGATTTGCCATATCCCAGGT------------ 1414 |||||||||||||| || |||| ||| || ||| Sbjct 13493 TGAGGATCTTGAAATATAGAAACAGCTAATATTTCCCAAATATGTGGTTGACGTAAACGA 13552 Query 1415 ATATACGCCACTCGTCGCTTGAGCTGCAGTGATGTATTCCCCTGTGCGTGAATCCATG 1472 || |||||| || ||||||| |||||||||||||||||||||||| ||||||| Sbjct 13553 CTAGACGCCATTCATCGCTTGTTGAGCAGTGATGTATTCCCCTGTGCGTATATCCATG 13610 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 8710463969914