Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Solanum_20melongena_20[genbank_20GCA_5F000787875.1_202014-09-30] 33,873 sequences; 833,080,760 total letters Query= NC_007723.1 Length=2761 Score E Sequences producing significant alignments: (Bits) Value seq19028 250 4e-63 >seq19028 Length=31091 Score = 250 bits (276), Expect = 4e-63 Identities = 485/708 (69%), Gaps = 21/708 (3%) Strand=Plus/Plus Query 1619 GCATTCTTCAAAGCCCAATTTTTGAGTGCGCTATTTTTCTCTTCATCCAAGAACTCTTTA 1678 ||||| | ||||| ||||||||| | | ||||||| || || || | |||||||||| Sbjct 13795 GCATTATGCAAAGACCAATTTTTTAATTTAATATTTTTTTCCTCCTCGAGGAACTCTTTA 13854 Query 1679 TAGCTGGAATTGGGTCCTGGATTGCAGAGGAAGATAGCGGGAATTCCACCTTTAATTTGA 1738 ||||||||| | || || |||||||| | |||||| | || || ||||| || || | Sbjct 13855 TAGCTGGAAGTAGGACCAGGATTGCACAAGAAGATTGTCGGTATCCCACCCTTTATCTTT 13914 Query 1739 ACTGGCTTTCCGTATTTTGTATTTGATTG-CCAGTCCCTTTGGGCCCCCATGAATTCTTT 1797 || ||| ||||||||||| ||| | | ||| | |||||||||||||| || ||||| Sbjct 13915 ACAGGCCTTCCGTATTTT-ACCTTGCTGGACCAATTGCTTTGGGCCCCCATAAACTCTTT 13973 Query 1798 AAAGTGTTTTAGATAATGAGGATCAACGTCATCAATGACGTTGTACCAGGCGTCATTACT 1857 |||||| ||||||||||| ||||| |||| |||||||| ||| |||||||| | ||| Sbjct 13974 AAAGTGCTTTAGATAATGCGGATCGACGTTATCAATGATGTTATACCAGGCATTATTTGA 14033 Query 1858 GTACACCTTTGGGCTAAGGTCGAGATGACCACACAAATAATTGTGTGGACCTAGTGACCT 1917 || | || | | || | |||||| || | ||||| ||||| |||| || || Sbjct 14034 ATAAATTTTATTATTCAAATCTAAATGACCGCATAGGTAATTATGTGGTCCTAAAGATCT 14093 Query 1918 CGCCCACACCGTCTTGCCCGTTCGACTATCACCCTGTATGACTACACTTACGGGTCG-TA 1976 |||||| | ||||| || |||| | ||||||| ||||| | ||| |||||| || Sbjct 14094 TGCCCACTCTGTCTTCCCTGTTCTAGACTCACCCTCAATGACAATACTCTTGGGTCGTTA 14153 Query 1977 ATGGCCGCGCAGCGGCAGACACCACATTCTCGGTAGCCCATTCTTCAAGTTCCTCGGGAA 2036 ||||||||||||||||| | ||||| || | ||||| || ||| | Sbjct 14154 ATGGCCGCGCAGCGGCATCCCTAACATTTTCAGCTGCCCA----GCA-----CTC----A 14200 Query 2037 CTTGATCAAAAGAAGAGGAAGAAAAAGGAGAAACATAAACCTCCGGTGGAGGTGTAAAAA 2096 ||| | || ||||| || ||||||| ||||||| || || || || | || | Sbjct 14201 ATTG-TTGAAGGAAGAACAACTAAAAGGACTAACATAAGGTTCAGGAGGGGGCATGAATA 14259 Query 2097 TCCTATCTAAATTAGCATTTAAATTATGAAACTGTAAAACATAATCTTTG--GGAGCTTT 2154 | | |||||| || | | || ||||||| | || ||| | || ||||| || ||| Sbjct 14260 TTCGATCTAATTTTGGAACTATATTATGATATTG--AAATAGAAACTTTGCTGGCATTTT 14317 Query 2155 CTCCCTTAAAATATTGAGGGCCGCAGCTTTGGACCATGAATTGATTGCCTCGGCATATGC 2214 || || | |||| || || | | | || | | | | || || ||| || | Sbjct 14318 TTCTCTAATAATAGAAAGCGCTTCTTCAATTGATGTAGCACTTAACGCTTCTGCAGATAC 14377 Query 2215 GTCGTTGGCAGATTGCTGACCTCCTCTAGCTGATCTGCCATCGATCTGGAAAACTCCAAA 2274 || || | | || |||||||||||| |||| |||||||| || ||| || | Sbjct 14378 ATCATTTGTTGTATGTGAACCTCCTCTAGCAGATCGTCCATCGATTTGAAAATTGCCCCA 14437 Query 2275 ATCAATGAAGTCTCCGTCTTTCTCCACGTAGGCTTTGACATCTGTAGA 2322 || || | || | ||||||| | | ||| || ||||||| ||| Sbjct 14438 GTCGGTGTAATCACAGTCTTTCGCGATGTATTTCTTAACATCTGAAGA 14485 Score = 165 bits (182), Expect = 1e-37 Identities = 268/383 (70%), Gaps = 7/383 (2%) Strand=Plus/Plus Query 969 CATACTGAGAATGCATTGATGTTGTACATGGCGTGTACTCATGCCTCTAACCCTGTGTAT 1028 |||||||| ||||||||| ||||| || | |||||||| ||||| ||||| ||| Sbjct 13084 CATACTGAAAATGCATTG---TTGTATATTAGTTCAACTCATGCATCTAATCCTGTATAT 13140 Query 1029 GCTACTTTGAAGATACGGATCTATTTCTATGATTCCGTAACAAATTAATAAATATTGAAT 1088 |||| ||| | ||| | ||||| ||||| ||| |||||||||||||||||||| Sbjct 13141 TGTACTATGAGAACACGCAGTTATTTTTATGAGAGTGTATCAAATTAATAAATATTGAAT 13200 Query 1089 TTTATTATGCTTGAACTTT--GTACATAAATTGTTTGCGCTAATACATTCCATAATACAT 1146 |||||| | ||| || |||||| | ||||||| | | |||||| ||||||||| Sbjct 13201 TTTATTT--CATGATATTCAAGTACATCCACTGTTTGCTCAATTACATTGAATAATACAT 13258 Query 1147 GATCGACTGCTCTAATTACATTGTTTATACTAATTACAGCAAAATTATTTAAAAACTGCA 1206 || || |||||||| | |||||| |||||||| ||| | || | |||||| | || Sbjct 13259 TGTCTACAGCTCTAATAATATTGTTAATACTAATAACACCTAATCGGTCTAAAAATTTCA 13318 Query 1207 AAACTTGGGTCCTAAAGACCCTTAAGAAATGACCAGTCCGAGGCTGTAAGGTCGTCCAGA 1266 || | |||| || ||||||||| ||| |||| |||| |||| || Sbjct 13319 TTACACGAAATTTAAATACTCTTAAGAAAACGTATGTCGGAGGACGTAAACGAGTCCTGA 13378 Query 1267 TTCGGAAGGTTAGAAAACATTTGTGTATCCCCAACGCTTTCCTCAGGTTGTGATTGAACT 1326 | |||| | || ||| |||||| | || | |||||||||||||| ||||| Sbjct 13379 TCTTGAAGTTGAGGAAAGCTTTGTGAAGATTCAGTTCCTTCCTCAGGTTGTGGTTGAATC 13438 Query 1327 GTACTTGGACTGTGATGATGTCG 1349 | | ||| | | ||| |||||| Sbjct 13439 GAATTTGTATTTCGATTATGTCG 13461 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 8723259363186