Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Solanum_20melongena_20[genbank_20GCA_5F000787875.1_202014-09-30] 33,873 sequences; 833,080,760 total letters Query= NC_007724.1 Length=2745 Score E Sequences producing significant alignments: (Bits) Value seq19028 347 2e-92 >seq19028 Length=31091 Score = 347 bits (384), Expect = 2e-92 Identities = 738/1088 (68%), Gaps = 83/1088 (8%) Strand=Plus/Plus Query 993 ACTCATGCCTCAAATCCCGTGTATGCTACTTTGAAAGTAAGGAGTTATTTCTATGACTCC 1052 |||||||| || ||||| || ||| |||| ||| | | | |||||||| ||||| Sbjct 13117 ACTCATGCATCTAATCCTGTATATTGTACTATGAGAACACGCAGTTATTTTTATGAGAGT 13176 Query 1053 GTCACCAATTAATAAATATTGAATTTTATATCATGCTTTTCAATTACATCTATTGTTCCA 1112 || | ||||||||||||||||||||||| ||||| | ||||| |||||| | |||| Sbjct 13177 GTATCAAATTAATAAATATTGAATTTTATTTCATGATATTCAAGTACATCCACTGTTTGC 13236 Query 1113 TTCAATACATCATATAATACAT-GACTAAAAGCCCCTAATACAATTGTTAATGCTAATCA 1171 | | ||||| ||||||||| | ||| | | |||||| ||||||||| ||||| | Sbjct 13237 TCAATTACATTGAATAATACATTGTCTACAG--CTCTAATAATATTGTTAATACTAATAA 13294 Query 1172 CTCCCAACCTATCTAAATATTTAATAAATTGGTACTTAAATACTCTTAAGAAATGCGAGG 1231 | || || | |||||| |||| || | | | |||||||||||||||||| | | Sbjct 13295 CACCTAATCGGTCTAAAAATTTCATTACACGAAATTTAAATACTCTTAAGAAAACGTATG 13354 Query 1232 TCTGAGGATGTAAACGAGTCCAGATTTGGCAGGTTAGAAAACATTTGTGTATCCCCAACG 1291 || ||||| |||||||||||| ||| | | || | || ||| |||||| | || Sbjct 13355 TCGGAGGACGTAAACGAGTCCTGATCTTGAAGTTGAGGAAAGCTTTGTGAAGATTCAGTT 13414 Query 1292 CTTTCCTCAGGTTGTAGTTGAATTGGACTTGTACTGTGATGATGTCGTGGTTCCTCAGAA 1351 | ||||||||||||| ||||||| | | ||||| | ||| ||||| |||| || ||| Sbjct 13415 CCTTCCTCAGGTTGTGGTTGAATCGAATTTGTATTTCGATTATGTC--GGTT-GTC-GAA 13470 Query 1352 ----ATGGACTCTCGTGGTGTTTGGTTATCTTGAAATATAG-----GGGATTTTTGACC- 1401 ||| || | ||| ||| |||||||||||||| | | | || || Sbjct 13471 TTTGTTGGTCTGAGATTGTGGTTGAGGATCTTGAAATATAGAAACAGCTAATATTTCCCA 13530 Query 1402 --------GTCCAGATA------TACACGCCATTCTCTGATTGAGTTGCAGTGA-GTAGT 1446 || | || || ||||||||| | ||| ||||||| ||| | Sbjct 13531 AATATGTGGTTGACGTAAACGACTAGACGCCATTCATCGCTTGTTGAGCAGTGATGTA-T 13589 Query 1447 TCCCCTGTGCGTGAATCCATGATCAGCGCAATTAATGCTGCTGTAATA-AGAACAGCCAC 1505 |||||||||||| |||||||| ||| || |||| | || |||| ||||| |||| Sbjct 13590 TCCCCTGTGCGTATATCCATGACCAGAACAGCTAATATTTTTG-AATATTGAACATCCAC 13648 Query 1506 ATGGGAGATCAACCCTCCTCCTCCTGATTGGCTTCTTCTTG----GCGAGTCGGT----- 1556 | || || || | | || || |||||| | |||||||| || | || Sbjct 13649 AAGGCAGGTCTAGTCGTCTTCTTCTGATTTGTCTCTTCTTGATATCCGGATATGTAAATG 13708 Query 1557 --GTTG---------------GACTTTG------ATGGGA-------ACCTG--AGTAGA 1584 |||| | || || ||||| |||| | | | Sbjct 13709 AGGTTGCTTTCCTTGTATAATGTCTATGCATCCATTGGGATAACATTTCCTGCACGAATA 13768 Query 1585 GTGGCTCTTCGAGGGTGATGAAGGTCGCATTCTTTAAAG-CCCAGTTTCGAAGTGCGGAG 1643 ||| | | || |||| ||| ||||| | |||| || | ||| || | | Sbjct 13769 ATGGTTGTGTGATGGTGTAGAATTCTGCATTATGCAAAGACCAATTTTTTAATTTAATAT 13828 Query 1644 TTCTTTTCCTCGTCCAAGTACTCTTTATAGCTGGAATTTGGACCTGGATTGCAGAGGAAG 1703 || ||| |||| || | | ||||||||||||||||| | ||||| |||||||| | |||| Sbjct 13829 TTTTTT-CCTCCTCGAGGAACTCTTTATAGCTGGAAGTAGGACCAGGATTGCACAAGAAG 13887 Query 1704 ATTGTGGGTATCCCGCCTTTAATTTGAACTGGCTTCCCGTACTTGGTA-TTTGACGG-CC 1761 ||||| |||||||| || || || | || ||| | ||||| || || ||| || || Sbjct 13888 ATTGTCGGTATCCCACCCTTTATCTTTACAGGCCTTCCGTATTT--TACCTTGCTGGACC 13945 Query 1762 AGTCCCTTTGGGCCCCCATGAACTCTTTGAAGTGCTTTAGGTAATGCGGATCTACGTCAT 1821 | | |||||||||||||| |||||||| ||||||||||| ||||||||||| |||| || Sbjct 13946 AATTGCTTTGGGCCCCCATAAACTCTTTAAAGTGCTTTAGATAATGCGGATCGACGTTAT 14005 Query 1822 CAATGACGTTATACCATGCGTCGTTGCTGTAGATCTTTGGGCTGAGATCTAGATGTCCAC 1881 |||||| ||||||||| || | || || || || | | ||||| ||| || | Sbjct 14006 CAATGATGTTATACCAGGCATTATTTGAATAAATTTTATTATTCAAATCTAAATGACCGC 14065 Query 1882 ATAAATAATTATGTGGTCCTAATGACCTGGCCCACATTGTCTTTCCCGTACGACTATCGC 1941 ||| ||||||||||||||||| || || |||||| |||||| || || | | || | Sbjct 14066 ATAGGTAATTATGTGGTCCTAAAGATCTTGCCCACTCTGTCTTCCCTGTTCTAGACTCAC 14125 Query 1942 CCTCCACCACTATACTCATCGGTC-TTAACGGCCGCGCAGCGGCACTCACAACATTATCG 2000 |||| | || |||||| | |||| |||| ||||||||||||||| | |||||| || Sbjct 14126 CCTCAATGACAATACTCTTGGGTCGTTAATGGCCGCGCAGCGGCATCCCTAACATTTTCA 14185 Query 2001 ACCGCCCA 2008 | ||||| Sbjct 14186 GCTGCCCA 14193 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 8672077790098