Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Solanum_20melongena_20[genbank_20GCA_5F000787875.1_202014-09-30] 33,873 sequences; 833,080,760 total letters Query= NC_007726.1 Length=2674 Score E Sequences producing significant alignments: (Bits) Value seq19028 208 1e-50 >seq19028 Length=31091 Score = 208 bits (230), Expect = 1e-50 Identities = 554/828 (67%), Gaps = 40/828 (5%) Strand=Plus/Plus Query 1578 ATTCTCTTCTTTGTCGAGGAAATCTTTATAACTGACTCCCTCACCAGGATTGCAGAGCAC 1637 ||| | ||| | |||||||| |||||||| ||| |||||||||||| | | Sbjct 13827 ATTTTTTTCCTCCTCGAGGAACTCTTTATAGCTGGAAGTAGGACCAGGATTGCACAAGAA 13886 Query 1638 GATTGCTGGGATGCCAACTGTAATTTGAACTGGCTTTCCGTATTTGCAATTTGACTG--C 1695 ||||| || || ||| | | || | || ||| |||||||||| | ||| ||| | Sbjct 13887 GATTGTCGGTATCCCACCCTTTATCTTTACAGGCCTTCCGTATTTT-ACCTTG-CTGGAC 13944 Query 1696 CAGTCTTTTTGAGCACCAATCAATTCCTTCCAGTGCTTTAACTTTAGATAATGCGGTGCG 1755 || | |||| || || || || || || ||||||||| |||||||||| || Sbjct 13945 CAATTGCTTTGGGCCCCCATAAACTCTTTAAAGTGCTTTA------GATAATGCGGATCG 13998 Query 1756 ACGTCATCAATGACGTTATACTCCACTTCGTTCGAGAAAACCTTTGAGTTGAAGTCCAGA 1815 |||| |||||||| ||||||| | | || || ||| || || || || | | Sbjct 13999 ACGTTATCAATGATGTTATACCAGGCATTATTTGAATAAATTTTATTATTCAAATCTAAA 14058 Query 1816 TGGCCACTCAAGTAATTATGTGGGCCTAATGCACGAGCCCACATCGTCTTCCCTGTCCTT 1875 || || | | |||||||||||| ||||| | | |||||| ||||||||||| || Sbjct 14059 TGACCGCATAGGTAATTATGTGGTCCTAAAGATCTTGCCCACTCTGTCTTCCCTGTTCTA 14118 Query 1876 GAATCACCTTCGACTATCAAACTCTTAGGTC-TCAATGGCCGCGCAGCTGAACCTCTCCC 1934 || ||||| || | | | |||||| |||| | |||||||||||||| | | | || Sbjct 14119 GACTCACCCTCAATGACAATACTCTTGGGTCGTTAATGGCCGCGCAGCGGCATC---CCT 14175 Query 1935 AAAATATTCATCGGCCCACTCTTGCATCTCGTCGGGAACGTTAGTGAAGGAGGAGAGGGG 1994 || || |||| | ||||| ||| ||| || || ||||||| || Sbjct 14176 AACATTTTCAGCTGCCCA-----GCA-CTC------AA--TTGTTGAAGGAAGAACAACT 14221 Query 1995 AAACGGAGGAACCCATGGCTCCGGAGCCTTTGAGAAAATTCTATCTAAATTAGAATTTAA 2054 ||| ||| ||| | || || |||| ||| |||| |||||| || | | || Sbjct 14222 AAAAGGACTAACATAAGGTTCAGGAGGGGGCATGAATATTCGATCTAATTTTGGAACTAT 14281 Query 2055 ATTATGAAATTGAAAAAGATATTTCTCCGGCAACTTCTCTTTAATTATTTGAAGAGCCGT 2114 ||||||| ||||||| ||| | || | |||| || ||| ||| || | ||| ||| | Sbjct 14282 ATTATGATATTGAAATAGAAACTTTGCTGGCATTTTTTCTCTAA-TAATAGAA-AGCGCT 14339 Query 2115 TCGTTTAT--CCGGAGCATTTAACGCCTCAGCTGCAGCGTCATTAGCCGTATGCTGACCT 2172 || | || | |||| ||||||| || || | | ||||| | ||||| |||| Sbjct 14340 TCTTCAATTGATGTAGCACTTAACGCTTCTGCAGATACATCATTTGTTGTATGTGAACCT 14399 Query 2173 CCTCTAGCACTTCGTCCGTCGACCTGGAATTTCCCCCATTCGAGAGT-ATCTCCGTCTTT 2231 ||||||||| |||||| |||| || || || ||||| ||| | || ||| | |||||| Sbjct 14400 CCTCTAGCAGATCGTCCATCGATTTGAAAATTGCCCCAGTCG-GTGTAATCACAGTCTTT 14458 Query 2232 GTCGATGTAGGACTTGACGTCGGACGATGATTTAGCTCCCTGAATGTTCGGATGGAAATG 2291 ||||||| ||| || || || ||||||||||| || | ||| || ||| ||| Sbjct 14459 CGCGATGTATTTCTTAACATCTGAAGATGATTTAGCGGATTGGAAGTTTGGGTGG-TATG 14517 Query 2292 TGCTGACCTTGT-TTGGGAT--ACCAGGTCGAAGAGTCTTTGATTTGTGCAGACGAACTT 2348 || || || || || |||| | | |||||| |||| | ||| | | ||| Sbjct 14518 TGGTG--CTAGTATTAGGATGGATGATATCGAAGTGTCTAGGGTTTCTAAATTGTGCCTT 14575 Query 2349 CCCTTCGAACTGGATAAGCACGTGGAGATGAGGTTCCCCATCTTCGTG 2396 |||||||| || ||||| | ||| |||| ||||||||| | ||| Sbjct 14576 GCCTTCGAATTGAATAAGGGCATGGCTATGAAATTCCCCATCCTGGTG 14623 Score = 82.4 bits (90), Expect = 1e-12 Identities = 237/360 (66%), Gaps = 21/360 (6%) Strand=Plus/Plus Query 928 ATTATTGTATATGGCATGTACTCATGCATCTAACCCTGTGTATGCAACGCTGAAGATTCG 987 ||| |||||||| | |||||||||||||| ||||| ||| || ||| | || Sbjct 13098 ATTGTTGTATATTAGTTCAACTCATGCATCTAATCCTGTATATTGTACTATGAGAACACG 13157 Query 988 AATCTATTTCTATGATTCAATCACAAATTAATAAATTTTGAATTTTATTGAATGATTTTC 1047 | ||||| ||||| | ||||||||||||| |||||||||||| ||||| ||| Sbjct 13158 CAGTTATTTTTATGAGAGTGTATCAAATTAATAAATATTGAATTTTATTTCATGATATTC 13217 Query 1048 CAGTACAT----GATTTACATATGATCTGTCAGTCGCAAAACG--AACAGCTCTAATTAC 1101 ||||||| ||| | | | | | | | | | ||||||||||| | Sbjct 13218 AAGTACATCCACTGTTTGCTCAATTACATTGAATAATACATTGTCTACAGCTCTAATAAT 13277 Query 1102 ATTGTTTATCGTAATAATGCCTAATCGGTCTAAATACAACAT--GACTAAGTGT--CTAA 1157 |||||| || |||||| ||||||||||||||| | ||| || || | | || Sbjct 13278 ATTGTTAATACTAATAACACCTAATCGGTCTAAAAATTTCATTACACGAAATTTAAATAC 13337 Query 1158 ACCTATGCAAA--TAAGTCGTTCCAGAAGCTGTCAGAGATGTCGTCCAGACTTGGAAGTT 1215 | || | ||| || |||| || | || | || |||| || | |||||| Sbjct 13338 TCTTAAGAAAACGTATGTCG-----GAGGACGTAAACGA----GTCCTGATCTTGAAGTT 13388 Query 1216 CAGGAATGCCTGGTGGAGATCCAACGCTCTCCTGAGGTTGTGGTTGAACCGTATCTGGAT 1275 ||||| || | ||| |||| || | |||| |||||||||||||| || || || || Sbjct 13389 GAGGAAAGCTTTGTGAAGATTCAGTTCCTTCCTCAGGTTGTGGTTGAATCGAATTTGTAT 13448 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 8444959559520