Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Solanum_20melongena_20[genbank_20GCA_5F000787875.1_202014-09-30] 33,873 sequences; 833,080,760 total letters Query= NC_007730.2 Length=2745 Score E Sequences producing significant alignments: (Bits) Value seq19028 289 5e-75 >seq19028 Length=31091 Score = 289 bits (320), Expect = 5e-75 Identities = 742/1118 (66%), Gaps = 75/1118 (7%) Strand=Plus/Plus Query 952 CATACTGAGAACGCTTTGTTGTTGTATATGGCATGTACTCATGCTTCTAATCCAGTGTAT 1011 |||||||| || || ||||||| |||| | |||||||| |||||||| || ||| Sbjct 13084 CATACTGAAAATGCATTGTTGT---ATATTAGTTCAACTCATGCATCTAATCCTGTATAT 13140 Query 1012 GCTACTTTGAAGATACGGATATATTTTTATGACTCTGTATCAAATTAATAAAAATTAAAT 1071 |||| ||| | ||| | ||||||||||| ||||||||||||||||| ||| ||| Sbjct 13141 TGTACTATGAGAACACGCAGTTATTTTTATGAGAGTGTATCAAATTAATAAATATTGAAT 13200 Query 1072 TTTATTATTTCGAATTGTTTTACATATATTGTTC-CTGATAATACATTGTGTAATACATG 1130 |||||| | ||| ||||| | |||| || | | ||||||| |||||||| Sbjct 13201 TTTATTTCATGATATTCAAGTACATCCACTGTTTGCTCA-ATTACATTGAATAATACATT 13259 Query 1131 ATCTACTGCTCTAATTACAAGATTTAAAGAAATTACGCCTAAACTATCCAAGTATTTTAA 1190 ||||| |||||||| | | || | | ||| || ||||| | || || |||| | Sbjct 13260 GTCTACAGCTCTAATAATATTGTTAATACTAATAACACCTAATCGGTCTAAAAATTTCAT 13319 Query 1191 TACTTGTGTCTTAAATACTCTTAAGAAATGCGATGTCGCTGGACGTAAGTGACTCCAAAT 1250 ||| | |||||||||||||||||| |||||| |||||||| || ||| || Sbjct 13320 TACACGAAATTTAAATACTCTTAAGAAAACGTATGTCGGAGGACGTAAACGAGTCCTGAT 13379 Query 1251 GGTGAAAGTCAGATAACATTTGCGTAGTCCCAGTGCTTTCCTCAGGTAGTGGTTGAATTG 1310 |||| | || || |||| | || |||| | |||||||||| |||||||||| | Sbjct 13380 CTTGAAGTTGAGGAAAGCTTTGTGAAGATTCAGTTCCTTCCTCAGGTTGTGGTTGAATCG 13439 Query 1311 GATCCTGACTTCGATGATGTC-CTTGTTCATGTTGAATGGTCGTTGTAGGTGCTTTAGGA 1369 || | |||||| ||||| |||| | ||| ||||| | ||| || |||| Sbjct 13440 AATTTGTATTTCGATTATGTCGGTTGTCGAATTTG-TTGGTCTGAGATTGTGGTTGAGGA 13498 Query 1370 TCTTGAAATATAG-GGGATTTGGAACTTCCCAGATA-------------------AATAC 1409 ||||||||||||| | | | |||||| ||| | || Sbjct 13499 TCTTGAAATATAGAAACAGCTAATATTTCCCAAATATGTGGTTGACGTAAACGACTAGAC 13558 Query 1410 GCCATTCTGAGCTTGAGCTGCAGTGATGGGTTCCCCTGTGTGTGAATCCATGGTTGTGGC 1469 ||||||| ||||| ||||||||| |||||||||| || ||||||| | Sbjct 13559 GCCATTCATCGCTTGTTGAGCAGTGATGTATTCCCCTGTGCGTATATCCATGACCAGAAC 13618 Query 1470 AGTTGATGTGTCTGTATATTGAGCATCCACAGGGGAGGTCTA-TCCTCTTTCTTTTGATT 1528 || | || | | || ||||||| |||||||| || ||||||| || || ||||| ||||| Sbjct 13619 AGCTAATATTTTTGAATATTGAACATCCACAAGGCAGGTCTAGTCGTC-TTCTTCTGATT 13677 Query 1529 GGTCTTGCTT-TTGCTGCTC---TATGT-----AGG--GCTTTGATTG------------ 1565 |||| ||| ||| | | ||||| ||| ||||| ||| Sbjct 13678 TGTCT--CTTCTTGATATCCGGATATGTAAATGAGGTTGCTTTCCTTGTATAATGTCTAT 13735 Query 1566 GCA--CTT---GAGAACA---GCGGCTCGTATA--GGGTGAG-GAAGGT---------TG 1605 ||| | | || |||| | || || ||| || || | || ||| || Sbjct 13736 GCATCCATTGGGATAACATTTCCTGCACGAATAATGGTTGTGTGATGGTGTAGAATTCTG 13795 Query 1606 CATTTTTGAGTGACCAGTCTCTTAATGCTTTGtttttttCTTCGTCTAGGTATTCTTTAT 1665 |||| | | ||||| | | ||||| | |||||||| || || ||| | ||||||| Sbjct 13796 CATTATGCAAAGACCAATTTTTTAATTTAATATTTTTTTCCTCCTCGAGGAACTCTTTAT 13855 Query 1666 AGGATGATGTTGGCCCTGGATTGCATAGGAAGATTGTTGGAATCCCTCCTTTAATTTGAA 1725 || || || || || |||||||| | ||||||||| || ||||| || || || | | Sbjct 13856 AGCTGGAAGTAGGACCAGGATTGCACAAGAAGATTGTCGGTATCCCACCCTTTATCTTTA 13915 Query 1726 TGGGTTTTCCGTATTTCGTGTTGCTTTGCCACTCCCTTTGGGCCCCCATAAATTCTTTAT 1785 || |||||||||| ||||| ||| | ||||||||||||||||| |||||| Sbjct 13916 CAGGCCTTCCGTATTTTACCTTGCTGGACCAATTGCTTTGGGCCCCCATAAACTCTTTAA 13975 Query 1786 AGTGTTTTAGGTAGTGGGGGTCAACATCGTCAATGACGTTATACCACGCGTCATTGCTGT 1845 |||| ||||| || || || || || | ||||||| ||||||||| || | ||| | Sbjct 13976 AGTGCTTTAGATAATGCGGATCGACGTTATCAATGATGTTATACCAGGCATTATTTGAAT 14035 Query 1846 ATACTTTCGGGCTTAGGTCCAGGTGACCACATAGGTAGTTGTGTGGGCCTAGTGAACGAG 1905 | | ||| | | || | ||||| |||||||| || ||||| |||| || | | Sbjct 14036 AAATTTTATTATTCAAATCTAAATGACCGCATAGGTAATTATGTGGTCCTAAAGATCTTG 14095 Query 1906 CCCACATTGTCTTTCCTGTCCTGCTTTCTCCTTCTATTATTATACTGAGTGGTCG-GAGT 1964 ||||| |||||| ||||| || || || || || | ||||| ||||| | | Sbjct 14096 CCCACTCTGTCTTCCCTGTTCTAGACTCACCCTCAATGACAATACTCTTGGGTCGTTAAT 14155 Query 1965 GGCCGCAGGCCGGCGTCGGAAATATTTTCCGATGCCCA 2002 |||||| |||| || || |||||| | |||||| Sbjct 14156 GGCCGCGCAGCGGCATCCCTAACATTTTCAGCTGCCCA 14193 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 8672077790098