Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Solanum_20melongena_20[genbank_20GCA_5F000787875.1_202014-09-30] 33,873 sequences; 833,080,760 total letters Query= NC_008058.1 Length=2614 Score E Sequences producing significant alignments: (Bits) Value seq19028 140 5e-30 >seq19028 Length=31091 Score = 140 bits (154), Expect = 5e-30 Identities = 232/334 (69%), Gaps = 7/334 (2%) Strand=Plus/Plus Query 1525 TCGAGGTAGTATTTATAGCTAGCCCCCTCACCAGGATTGCATAGCACGATTGATGGAATG 1584 |||||| | | ||||||||| | |||||||||||| | | ||||| || || Sbjct 13840 TCGAGGAACTCTTTATAGCTGGAAGTAGGACCAGGATTGCACAAGAAGATTGTCGGTATC 13899 Query 1585 CCACCTTTAATTTGAATGGGTTTCCCGTATTTACAGTTGGTCTGCCAGTCTGTCTGGGCC 1644 ||||| || || | | || | |||||||| ||| | ||| | | |||||| Sbjct 13900 CCACCCTTTATCTTTACAGGCCTTCCGTATTTTACCTTGCTGGACCAATTGCTTTGGGCC 13959 Query 1645 CCAATGAGCTCTTTCCAGTGTTTCATCTTTAGATAGTGCGGTGGTACGTCATCAATGACG 1704 || || | |||||| |||| ||||||||| ||||| |||| |||||||| | Sbjct 13960 CCCATAAACTCTTTAAAGTG------CTTTAGATAATGCGGATCGACGTTATCAATGATG 14013 Query 1705 TTGTACATAACATCGTTTGAGTAAACTCTAGAATTGAAATCTAGATGACCACTCAAATAA 1764 || ||| ||| ||||| |||| | || ||| ||||||| |||||| | | ||| Sbjct 14014 TTATACCAGGCATTATTTGAATAAATTTTATTATTCAAATCTAAATGACCGCATAGGTAA 14073 Query 1765 TTATGAATTCCTAATGAACGAGCCCACATCGTCTTTCCCGTTCTTGAATCACCTTCGATG 1824 ||||| |||||| || | |||||| ||||| || ||||| || ||||| || ||| Sbjct 14074 TTATGTGGTCCTAAAGATCTTGCCCACTCTGTCTTCCCTGTTCTAGACTCACCCTCAATG 14133 Query 1825 ATGATACTGATAGGTC-TTAATGTCCGCGCAGCG 1857 | ||||| | |||| |||||| |||||||||| Sbjct 14134 ACAATACTCTTGGGTCGTTAATGGCCGCGCAGCG 14167 Score = 84.2 bits (92), Expect = 4e-13 Identities = 235/350 (67%), Gaps = 12/350 (3%) Strand=Plus/Plus Query 2103 ACCTCCTCTAGCAGATCTGCCATCGATTTGAAATTCTCCCCATTCGAGGGTATCTCCATC 2162 ||||||||||||||||| |||||||||||||| | ||||| ||| | ||| | || Sbjct 14396 ACCTCCTCTAGCAGATCGTCCATCGATTTGAAAATTGCCCCAGTCGGTGTAATCACAGTC 14455 Query 2163 TTTGTCGATATATGATTTGACATCGGAACTAGATTTAGCTCCCTGAATGTTCGGATGGAA 2222 ||| |||| ||| || ||||| ||| |||||||| || | ||| || ||| Sbjct 14456 TTTCGCGATGTATTTCTTAACATCTGAAGATGATTTAGCGGATTGGAAGTTTGGGTGG-T 14514 Query 2223 ATGTGCTGATCTGGT-TGGGGAT--ACCAGATCGAACTGTCGTTCATTCGTGATCTGGAC 2279 ||||| || || || | |||| | | |||||| |||| || | | || | Sbjct 14515 ATGTGGTG--CTAGTATTAGGATGGATGATATCGAAGTGTCTAGGGTTTCTAAATTGTGC 14572 Query 2280 TTTTCCTTCAAGTTGGACAAGGGCATGGAGATGAGGTTTCCCATTCTCGTGAAGCTCTCT 2339 || ||||| | ||| | |||||||||| |||| || ||||| || ||| ||| | Sbjct 14573 CTTGCCTTCGAATTGAATAAGGGCATGGCTATGAAATTCCCCATCCTGGTGTTTTTCT-T 14631 Query 2340 GCAAATCTTGATATATCGTTTATTCGAAGTTAGTTGTA--TTGATTGTAATTGCTCTAAT 2397 | | || | | | ||||||| |||| | | | || || || |||||||| Sbjct 14632 GACAGACTCTA-AAACAGTTTATTTGAAG-GACAAGAAACCTG-TTTCAAGTGCTCTAAG 14688 Query 2398 GCTTCATCTTTAGTAAGAGAGCATAATGGGTATGTTAGGAATATATTTTT 2447 || |||||||| ||||| ||| ||| |||| || ||||| ||||| Sbjct 14689 ATTTGATCTTTAGGAAGAGGACATTTTGGAAATGTAAGAAATATGTTTTT 14738 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 8253028660440