Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Solanum_20melongena_20[genbank_20GCA_5F000787875.1_202014-09-30] 33,873 sequences; 833,080,760 total letters Query= NC_008059.1 Length=2605 Score E Sequences producing significant alignments: (Bits) Value seq19028 159 6e-36 >seq19028 Length=31091 Score = 159 bits (176), Expect = 6e-36 Identities = 478/723 (66%), Gaps = 36/723 (5%) Strand=Plus/Plus Query 1502 TTTTCCTCCTTGTTCAGGAAATCTTTATAGCTAGCACCCTCACCAGGATTGCAAAGCACG 1561 |||||||||| | ||||| ||||||||||| | | |||||||||||| | | | Sbjct 13831 TTTTCCTCCTCG---AGGAACTCTTTATAGCTGGAAGTAGGACCAGGATTGCACAAGAAG 13887 Query 1562 ATTGATGGGATCCCACCTTTAATTTGAACTGGCTTTCCGTATTTGCAATTTGACTG--CC 1619 |||| || |||||||| || || | || ||| |||||||||| | ||| ||| || Sbjct 13888 ATTGTCGGTATCCCACCCTTTATCTTTACAGGCCTTCCGTATTTT-ACCTTG-CTGGACC 13945 Query 1620 AGTCCTTCTGGGCCCCCAGAAGTTCTTTCCAGTGCTTTAGCTTTAGATATTGCGGTGCGA 1679 | | | |||||||||| || ||||| |||||||||| ||| ||||| ||| Sbjct 13946 AATTGCTTTGGGCCCCCATAAACTCTTTAAAGTGCTTTAG------ATAATGCGGATCGA 13999 Query 1680 CGTCATCAATGACGTTATACTCCACTTCGTTTGAGTACACTCTTGGGTTGAAGTCCAGAT 1739 ||| |||||||| ||||||| | | ||||| || | | | || || || | || Sbjct 14000 CGTTATCAATGATGTTATACCAGGCATTATTTGAATAAATTTTATTATTCAAATCTAAAT 14059 Query 1740 GTCCACTAAGGTAATTGTGTGGGCCTAAGGCACGAGCCCACATCGTCTTCCCTGTCCTCG 1799 | || | |||||||| ||||| ||||| | | |||||| ||||||||||| || | Sbjct 14060 GACCGCATAGGTAATTATGTGGTCCTAAAGATCTTGCCCACTCTGTCTTCCCTGTTCTAG 14119 Query 1800 AGTCACCTTCTATGATGATACTTACTGGTCTCTCA-GGCCGCGCAGCGGAACCCCTTCCA 1858 | ||||| || |||| ||||| |||| | | ||||||||||||| | |||| | Sbjct 14120 ACTCACCCTCAATGACAATACTCTTGGGTCGTTAATGGCCGCGCAGCGGCATCCCT---A 14176 Query 1859 AAATATTCGTCCGCCCATGCTTGCATCTCGTCCGGAACTTTAGTGAACGAGGATAGTTGA 1918 | || ||| | ||||| ||| ||| || || |||| || || | Sbjct 14177 ACATTTTCAGCTGCCCA-----GCA-CTC------AA--TTGTTGAAGGAAGAACAACTA 14222 Query 1919 AACGGAGGAACCCATCGTTCCGGAGCCTTTGCGAATATTTTCTCT-AGGTTGGATCGTAT 1977 || ||| ||| | |||| |||| ||||||| ||| | ||||| | ||| Sbjct 14223 AAAGGACTAACATAAGGTTCAGGAGGGGGCATGAATATTCGATCTAATTTTGGAAC-TAT 14281 Query 1978 GTTATGGTTTTGCAGCACAAAATCCTTTGGCTGTTCTTCTTTTAAAACCGCCATGGCAGC 2037 ||||| | ||| | | ||| | |||| || |||| | | || | | || | Sbjct 14282 ATTATGATATTGAAATAGAAACTTTGCTGGCATTTTTTCTCTAATAATAGAAAGCGCTTC 14341 Query 2038 TTGAACAGATCCTGCATTCAACGCCTTGGCATATGAATCGTTAGCTGACTGCTGACCTCC 2097 || || ||| ||| | ||||| | ||| || ||| || | || || |||||| Sbjct 14342 TTCAATTGATGTAGCACTTAACGCTTCTGCAGATACATCATTTGTTGTATGTGAACCTCC 14401 Query 2098 CCTAGAAGATCTGCCGTCGATCTGGAATTCTCCCCAGTCAACTGT-ATCTCCGTCCTTCT 2156 |||| ||||| || ||||| || || | |||||||| ||| ||| | ||| ||| Sbjct 14402 TCTAGCAGATCGTCCATCGATTTGAAAATTGCCCCAGTC-GGTGTAATCACAGTCTTTCG 14460 Query 2157 CGATGTAGGACTTGACGTCGGAGCTGGATTTAGCTCCCTGTATGTTTGGATGGAAATGTG 2216 ||||||| ||| || || || |||||||| || | |||||| ||| ||||| Sbjct 14461 CGATGTATTTCTTAACATCTGAAGATGATTTAGCGGATTGGAAGTTTGGGTGG-TATGTG 14519 Query 2217 TTG 2219 || Sbjct 14520 GTG 14522 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 8224239025578