Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Solanum_20melongena_20[genbank_20GCA_5F000787875.1_202014-09-30]
33,873 sequences; 833,080,760 total letters
Query= NC_008236.1
Length=2768
Score E
Sequences producing significant alignments: (Bits) Value
seq19028 239 8e-60
>seq19028
Length=31091
Score = 239 bits (264), Expect = 8e-60
Identities = 568/848 (67%), Gaps = 29/848 (3%)
Strand=Plus/Plus
Query 1636 TTTTAATGCACTATTCTTTTCTTCATCAAGATATTCTATATAGGAGGCAGTTGGTCCTGG 1695
||||||| | |||| ||||| || || || | ||| ||||| || ||| || || ||
Sbjct 13815 TTTTAATTTAATATTTTTTTCCTCCTCGAGGAACTCTTTATAGCTGGAAGTAGGACCAGG 13874
Query 1696 ATTGCAAAGGAAGATTGTTGGGATTCCACCTTTAATTTGAATTGGCTTCCCATACTTTGT 1755
|||||| | ||||||||| || || ||||| || || | | ||| | || || |||
Sbjct 13875 ATTGCACAAGAAGATTGTCGGTATCCCACCCTTTATCTTTACAGGCCTTCCGTATTTTAC 13934
Query 1756 GTTGCTTTGCCAGTCTCGTTGGGCCCCCATGAATTCCTTAAAGTGCTTTAGATAGTGCGG 1815
||||| ||| | | |||||||||||| || || ||||||||||||||||| |||||
Sbjct 13935 CTTGCTGGACCAATTGCTTTGGGCCCCCATAAACTCTTTAAAGTGCTTTAGATAATGCGG 13994
Query 1816 GTCTACGTCATCAATGACGTTGTACCATGCATCATTGCTGTAGACTTTTGGGCTCAAGTC 1875
|| |||| |||||||| ||| ||||| |||| ||| || | ||| |||| ||
Sbjct 13995 ATCGACGTTATCAATGATGTTATACCAGGCATTATTTGAATAAATTTTATTATTCAAATC 14054
Query 1876 AAGATGACCACACAAATAGTTGTGTGGTCCCAGTGATCTTGCCCACATTGTCTTCCCTGT 1935
| |||||| || | || || |||||||| | |||||||||||| ||||||||||||
Sbjct 14055 TAAATGACCGCATAGGTAATTATGTGGTCCTAAAGATCTTGCCCACTCTGTCTTCCCTGT 14114
Query 1936 CCTGCTATCACCCTGTATGACTATACTTACAGGTC-TCCATGGCCGCGCAGCGGCATTGG 1994
|| ||||||| ||||| ||||| |||| | ||||||||||||||||||
Sbjct 14115 TCTAGACTCACCCTCAATGACAATACTCTTGGGTCGTTAATGGCCGCGCAGCGGCATCCC 14174
Query 1995 CTATGTTTTCAGAGACCCATTCTTCAAGTTCTTCTGGAACTTGATTAAAAGAAGATGAAA 2054
| ||||||| |||| |||| ||| || || ||||| ||
Sbjct 14175 TAACATTTTCAGCTGCCCAGCACTCAA-------------TTG-TTGAAGGAAGAACAAC 14220
Query 2055 TAAAAGGAGAAACATAAATATCTATAGGAGGTGTAAAGATCCTATCTAAATTACTATTTA 2114
|||||||| ||||||| || ||| || | || || | |||||| || | ||
Sbjct 14221 TAAAAGGACTAACATAAGGTTCAGGAGGGGGCATGAATATTCGATCTAATTTTGGAACTA 14280
Query 2115 AATTATGAAACTGTAAAACATAATCTTTGGGAGC-TTTCTCCCTTAATATATTGAGGGCC 2173
||||||| | || ||| | || ||||| || ||| | | ||||| || || | |
Sbjct 14281 TATTATGATATTG--AAATAGAAACTTTGCTGGCATTTTTTCTCTAATA-ATAGAAAG-C 14336
Query 2174 GAAACTT---TGGACCCTGAGTTGATTGCCTCGGCATACGCGTCGTTTGCAGATTGGCAA 2230
| ||| | || | | | || || ||| | | || |||| | || ||
Sbjct 14337 GCTTCTTCAATTGATGTAGCACTTAACGCTTCTGCAGATACATCATTTGTTGTATGTGAA 14396
Query 2231 CCTCCTCTAGCTGATCGTCCATCGATCTGGAAAACTCCAGAATCAAGGATGTCTCCGTCT 2290
||||||||||| |||||||||||||| || ||| || | || | || | ||||
Sbjct 14397 CCTCCTCTAGCAGATCGTCCATCGATTTGAAAATTGCCCCAGTCGGTGTAATCACAGTCT 14456
Query 2291 TTCTCCATGTAGGTTTTGACATCAGACGAGCTTTTAGCTCCCTGAATGTTTGGATGGAAA 2350
||| | ||||| | || ||||| || || |||||| || | |||||| ||| |
Sbjct 14457 TTCGCGATGTATTTCTTAACATCTGAAGATGATTTAGCGGATTGGAAGTTTGGGTGG-TA 14515
Query 2351 TGTGCTGACCTACT-TGGGGATG--TGAGATCGAAGAATCTATTATTTTTGCATTGGAAT 2407
|||| || ||| | | ||||| ||| ||||||| |||| ||| | ||||
Sbjct 14516 TGTGGTG--CTAGTATTAGGATGGATGATATCGAAGTGTCTAGGGTTTCTAAATTGTGCC 14573
Query 2408 TTTCCTTCGAACTGGATGAGAACATGCAGGTGAGGATTCCCATCGTTGTGTAGTTCTCTG 2467
|| |||||||| || || || |||| ||| | |||||| | |||| ||||
Sbjct 14574 TTGCCTTCGAATTGAATAAGGGCATGGCTATGAAATTCCCCATCCTGGTGTTTTTCTTGA 14633
Query 2468 CAGATTCT 2475
|||| |||
Sbjct 14634 CAGACTCT 14641
Score = 187 bits (206), Expect = 4e-44
Identities = 265/367 (72%), Gaps = 7/367 (2%)
Strand=Plus/Plus
Query 960 CATACAGAGAACGCCTTGTTATTGTATATGGCATGTACTCATGCCAGTAACCCTGTGTAT 1019
||||| || || || ||||| |||||| | |||||||| ||| ||||| |||
Sbjct 13084 CATACTGAAAATGCATTGTT---GTATATTAGTTCAACTCATGCATCTAATCCTGTATAT 13140
Query 1020 GCTACTTTGAAAATCAGGATCTATTTTTACGATTCTGT-TCAGAATTAATAAATATTGAA 1078
|||| ||| || | | |||||||| || ||| ||| |||||||||||||||||
Sbjct 13141 TGTACTATGAGAACACGCAGTTATTTTTATGAGAGTGTATCA-AATTAATAAATATTGAA 13199
Query 1079 TTTTATATCATGAAATTCCTGTACATACATTGTGTGTTGTAGTTTATTATATAATACATG 1138
|||||| |||||| |||| |||||| || ||| || | | | ||| |||||||||
Sbjct 13200 TTTTATTTCATGATATTCAAGTACATCCACTGTTTGCTCAATTACATTGAATAATACATT 13259
Query 1139 ATCTACTGCTCTAATTACATTATTAATAGATATTACACCTAAATTATCTAAATACTGCAT 1198
||||| |||||||| | ||| |||||| || |||||||| |||||| | | |||
Sbjct 13260 GTCTACAGCTCTAATAATATTGTTAATACTAATAACACCTAATCGGTCTAAAAATTTCAT 13319
Query 1199 GACTTGCTTCTTAAATACTCTCAAGAAACGCCATGTCTGAGGCTGTAAGCGAGTCCAGAC 1258
|| | ||||||||||| |||||| ||||| |||| |||| ||||||| ||
Sbjct 13320 TACACGAAATTTAAATACTCTTAAGAAAACGTATGTCGGAGGACGTAAACGAGTCCTGAT 13379
Query 1259 TTCGAAAATCA-GAAAGCATTTGTGAATTCCCAGTTGAGTTCTCAGGTTGTAGTTGAATT 1317
| ||| | | |||||| |||||||| ||||| | |||||||||| |||||||
Sbjct 13380 CTTGAAGTTGAGGAAAGC-TTTGTGAAGATTCAGTTCCTTCCTCAGGTTGTGGTTGAATC 13438
Query 1318 GAATCTG 1324
|||| ||
Sbjct 13439 GAATTTG 13445
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 8742359878185
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