Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Solanum_20melongena_20[genbank_20GCA_5F000787875.1_202014-09-30] 33,873 sequences; 833,080,760 total letters Query= NC_008299.1 Length=2759 Score E Sequences producing significant alignments: (Bits) Value seq19028 246 5e-62 >seq19028 Length=31091 Score = 246 bits (272), Expect = 5e-62 Identities = 297/400 (74%), Gaps = 3/400 (1%) Strand=Plus/Plus Query 1618 GCATTCTTTAATGCCCAATTTTTGAGTGCAGAATTCTTCTCCTCATCCAAAAACTCTTTA 1677 ||||| | || | ||||||||| | | | ||| || ||||| || | ||||||||| Sbjct 13795 GCATTATGCAAAGACCAATTTTTTAATTTAATATTTTTTTCCTCCTCGAGGAACTCTTTA 13854 Query 1678 TAGCTTGAGTTGGGTCCTGGATTGCAGAGGAAGATAGTGGGAATTCCGCCTTTAATTTGA 1737 ||||| || | || || |||||||| | |||||| || || || || || || || | Sbjct 13855 TAGCTGGAAGTAGGACCAGGATTGCACAAGAAGATTGTCGGTATCCCACCCTTTATCTTT 13914 Query 1738 ACTGGCTTTCCGTACTTTGTATTTGATTG-CCAGTCCCTTTGGGCCCCCATGAATTCTTT 1796 || ||| ||||||| ||| || | | | ||| | |||||||||||||| || ||||| Sbjct 13915 ACAGGCCTTCCGTATTTTACCTT-GCTGGACCAATTGCTTTGGGCCCCCATAAACTCTTT 13973 Query 1797 AAAGTGCTTTAGGTAGTGGGGATCGACGTCATCAATGACGTTGTACCAGGCCTCGTTGCT 1856 |||||||||||| || || |||||||||| |||||||| ||| |||||||| | || Sbjct 13974 AAAGTGCTTTAGATAATGCGGATCGACGTTATCAATGATGTTATACCAGGCATTATTTGA 14033 Query 1857 GTAAACCTTTGGACTAAGGTCTAGATGACCACACAGATAATTGTGTGGACCCAGTGACCT 1916 |||| || | | | |||| |||||| || || ||||| ||||| || | || || Sbjct 14034 ATAAATTTTATTATTCAAATCTAAATGACCGCATAGGTAATTATGTGGTCCTAAAGATCT 14093 Query 1917 GGCCCACATTGTCTTCCCCGTACGACTATCACCCTCTATGACAATACTTTTAGGTC-TCA 1975 |||||| ||||||||| || | | |||||||| ||||||||||| || |||| | | Sbjct 14094 TGCCCACTCTGTCTTCCCTGTTCTAGACTCACCCTCAATGACAATACTCTTGGGTCGTTA 14153 Query 1976 ATGGCCGCGCAGCGGCACCCACGACGTTCTCAGCAGCCCA 2015 ||||||||||||||||| || || || ||||| ||||| Sbjct 14154 ATGGCCGCGCAGCGGCATCCCTAACATTTTCAGCTGCCCA 14193 Score = 150 bits (166), Expect = 3e-33 Identities = 252/361 (70%), Gaps = 5/361 (1%) Strand=Plus/Plus Query 964 GAATCATACTGAGAATGCGTTAATGTTGTATATGGCGTGTACTCACGCCTCTAACCCTGT 1023 || ||||||||| ||||| || ||||||||| | ||||| || ||||| ||||| Sbjct 13080 GACTCATACTGAAAATGCATT---GTTGTATATTAGTTCAACTCATGCATCTAATCCTGT 13136 Query 1024 GTATGCTACATTGAAGATACGGATCTACTTCTATGATTCAGTATCGAATTAATAAATATT 1083 ||| ||| ||| | ||| | || || ||||| ||||| |||||||||||||| Sbjct 13137 ATATTGTACTATGAGAACACGCAGTTATTTTTATGAGAGTGTATCAAATTAATAAATATT 13196 Query 1084 GAATTTTA-TTGAAGATGATTGTTTTACATATACAATATGCTCTAATACATTCCATAATA 1142 |||||||| || | ||| ||| ||||| || | ||||| | |||||| |||||| Sbjct 13197 GAATTTTATTTCATGAT-ATTCAAGTACATCCACTGTTTGCTCAATTACATTGAATAATA 13255 Query 1143 CATGATCAACTGCTCTAATTACATTGTTAATACTGATAACTCCTAGATTATCTAAATACT 1202 ||| || || |||||||| | |||||||||||| ||||| |||| |||||| | | Sbjct 13256 CATTGTCTACAGCTCTAATAATATTGTTAATACTAATAACACCTAATCGGTCTAAAAATT 13315 Query 1203 TAAGCACTTGTGTCTTAAAGACCCTTAAGAAACGACCAGTCGGAGGCTGTGAGGTCATCC 1262 | | || | ||||| || ||||||||| |||||||| || | ||| Sbjct 13316 TCATTACACGAAATTTAAATACTCTTAAGAAAACGTATGTCGGAGGACGTAAACGAGTCC 13375 Query 1263 AGATTCGGAAGGCTAGGAAACATTTGTGTATTCCCAACGCTTTCCTCAGGTTGTGATTGA 1322 ||| |||| |||||| |||||| | || | |||||||||||||| |||| Sbjct 13376 TGATCTTGAAGTTGAGGAAAGCTTTGTGAAGATTCAGTTCCTTCCTCAGGTTGTGGTTGA 13435 Query 1323 A 1323 | Sbjct 13436 A 13436 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 8716861666550