Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Solanum_20melongena_20[genbank_20GCA_5F000787875.1_202014-09-30] 33,873 sequences; 833,080,760 total letters Query= NC_008304.1 Length=2613 Score E Sequences producing significant alignments: (Bits) Value seq19028 125 1e-25 >seq19028 Length=31091 Score = 125 bits (138), Expect = 1e-25 Identities = 218/314 (69%), Gaps = 11/314 (4%) Strand=Plus/Plus Query 1561 CCTGGATTGCACAGCACGATTGATGGGATACCTCCTTTAATTTGAACCGGCTTTCCATAT 1620 || |||||||||| | ||||| || || || || || || | || ||| |||| ||| Sbjct 13870 CCAGGATTGCACAAGAAGATTGTCGGTATCCCACCCTTTATCTTTACAGGCCTTCCGTAT 13929 Query 1621 TTACAGTTGGACTG--CCAGTCCTTTTGGGCCCCAATCAATTCCTTCCAGTGCTTTAGCT 1678 || ||| ||| ||| | |||||||||| || || || || |||||||||| | Sbjct 13930 TTTACCTTG--CTGGACCAATTGCTTTGGGCCCCCATAAACTCTTTAAAGTGCTTTAGAT 13987 Query 1679 TTAAGTATTGCGGATTGACATCATCTATGACGTTATACTCCACTTGATTGGAGTATACCC 1738 | ||||||| ||| | ||| |||| ||||||| | | ||| || || | Sbjct 13988 ------AATGCGGATCGACGTTATCAATGATGTTATACCAGGCATTATTTGAATAAATTT 14041 Query 1739 TAGAATTGAAATCAAGATGACCGCTCAGATAATTATGTGGGCCTAAAGCACGAGCCCACA 1798 || ||| ||||| | |||||||| || ||||||||||| ||||||| | |||||| Sbjct 14042 TATTATTCAAATCTAAATGACCGCATAGGTAATTATGTGGTCCTAAAGATCTTGCCCACT 14101 Query 1799 TTGTCTTGCCCGTTCGTGAATCCCCTTCGACTATCAAACTAATCGGTC-TCTCTGGCCGC 1857 |||||| || |||| || || || || | | | ||| | |||| | ||||||| Sbjct 14102 CTGTCTTCCCTGTTCTAGACTCACCCTCAATGACAATACTCTTGGGTCGTTAATGGCCGC 14161 Query 1858 GCAGCGGCACCCCT 1871 ||||||||| |||| Sbjct 14162 GCAGCGGCATCCCT 14175 Score = 93.3 bits (102), Expect = 7e-16 Identities = 251/381 (66%), Gaps = 30/381 (8%) Strand=Plus/Plus Query 847 GAATCATACGGAGAACGCGTTGTTATTGTATATGGCATGTACTCATGCATCTAACCCCGT 906 || |||||| || || || ||||| |||||| | |||||||||||||| || || Sbjct 13080 GACTCATACTGAAAATGCATTGTT---GTATATTAGTTCAACTCATGCATCTAATCCTGT 13136 Query 907 GTATGCGACATTGAAAATTCGGATCTATTTTTATGATTCGATAATGAATTAATAAATATT 966 ||| || ||| || || | ||||||||||| || |||||||||||||| Sbjct 13137 ATATTGTACTATGAGAACACGCAGTTATTTTTATGAGAGTGTATCAAATTAATAAATATT 13196 Query 967 AAACTTTATTTCATGATCTTCGAGTACA------------TAATTTACATATGAACGGTC 1014 || ||||||||||||| ||| |||||| | | |||||| |||| | Sbjct 13197 GAATTTTATTTCATGATATTCAAGTACATCCACTGTTTGCTCAATTACAT-TGAATAATA 13255 Query 1015 TGTTGCGAAACGCACAGCTCTAATGACATTATTAATTCCAATCACACCAAGCCGATCTAA 1074 ||| ||||||||||| | ||| ||||| | ||| ||||| | || ||||| Sbjct 13256 CATTG-----TCTACAGCTCTAATAATATTGTTAATACTAATAACACCTAATCGGTCTAA 13310 Query 1075 ATACAACAT--AACTAAATGCCTAAAGCGACTTAA-ATAGCTCGTCCCAGAAGCTCGAAC 1131 | | ||| || |||| |||| ||||| | | | | | || | || Sbjct 13311 AAATTTCATTACACGAAAT--TTAAATACTCTTAAGAAAACGTATGTCGGAGGACGTAAA 13368 Query 1132 TGATGTCGTCCAGACTTGGAAGTTCAGGTAGGCTTGGTGTAGATTCAACGCCTTCCTGAG 1191 || |||| || | |||||| ||| | |||| ||| ||||||| ||||||| || Sbjct 13369 CGA----GTCCTGATCTTGAAGTTGAGGAAAGCTTTGTGAAGATTCAGTTCCTTCCTCAG 13424 Query 1192 GTTGTAGTTGAACCGGATTTG 1212 ||||| |||||| || ||||| Sbjct 13425 GTTGTGGTTGAATCGAATTTG 13445 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 8249829812122