Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Solanum_20melongena_20[genbank_20GCA_5F000787875.1_202014-09-30] 33,873 sequences; 833,080,760 total letters Query= NC_008317.1 Length=2784 Score E Sequences producing significant alignments: (Bits) Value seq19028 210 4e-51 >seq19028 Length=31091 Score = 210 bits (232), Expect = 4e-51 Identities = 262/358 (73%), Gaps = 1/358 (0%) Strand=Plus/Plus Query 1650 TTTTAATGCACTATTCTTCTCTTCATCAAGATATTCTATATAGGATGCCGTTGGTCCTGG 1709 ||||||| | |||| || || || || || | ||| ||||| | || || || || Sbjct 13815 TTTTAATTTAATATTTTTTTCCTCCTCGAGGAACTCTTTATAGCTGGAAGTAGGACCAGG 13874 Query 1710 ATTGCAGAGGAAGATTGTTGGGATTCCACCTTTAATTTGAATTGGTTTCCCATACTTGGT 1769 |||||| | ||||||||| || || ||||| || || | | || | || || || Sbjct 13875 ATTGCACAAGAAGATTGTCGGTATCCCACCCTTTATCTTTACAGGCCTTCCGTATTTTAC 13934 Query 1770 GTTGCTTTGCCAGTCCCTTTGGGCCCCCATGAATTCTTTAAAGTGCTTTAGATAGTGCGG 1829 ||||| ||| | |||||||||||||| || |||||||||||||||||||| ||||| Sbjct 13935 CTTGCTGGACCAATTGCTTTGGGCCCCCATAAACTCTTTAAAGTGCTTTAGATAATGCGG 13994 Query 1830 GTCTACGTCATCAATGACGTTATACCATGCGTCATTGCTGTAGACCTTTGGACTCAAGTC 1889 || |||| |||||||| ||||||||| || | ||| || | || | |||| || Sbjct 13995 ATCGACGTTATCAATGATGTTATACCAGGCATTATTTGAATAAATTTTATTATTCAAATC 14054 Query 1890 AAGATGACCACACAAGTAGTTGTGTGGCCCTAATGACCTTGCCCACATTGTCTTGCCTGT 1949 | |||||| || | ||| || ||||| ||||| || ||||||||| |||||| ||||| Sbjct 14055 TAAATGACCGCATAGGTAATTATGTGGTCCTAAAGATCTTGCCCACTCTGTCTTCCCTGT 14114 Query 1950 CCTGCTATCACCCTCTATGACTATACTTACAGGTC-TCCATGGCCGCGCAGCGGCATC 2006 || |||||||| ||||| ||||| |||| | ||||||||||||||||||| Sbjct 14115 TCTAGACTCACCCTCAATGACAATACTCTTGGGTCGTTAATGGCCGCGCAGCGGCATC 14172 Score = 199 bits (220), Expect = 7e-48 Identities = 275/376 (73%), Gaps = 9/376 (2%) Strand=Plus/Plus Query 970 GAATCATACGGAGAATGCATTATTATTGTATATGGCATCAACACATGCCAGTAACCCTGT 1029 || |||||| || |||||||| || |||||| ||||| ||||| ||| ||||| Sbjct 13080 GACTCATACTGAAAATGCATTGTT---GTATATTAGTTCAACTCATGCATCTAATCCTGT 13136 Query 1030 GTATGCGACTTTAAAGATCA-GAATCTATTTCTATGATTCTGT-TCAGAATTAATAAATA 1087 ||| ||| | | || || | | ||||| ||||| ||| ||| |||||||||||| Sbjct 13137 ATATTGTACTATGA-GAACACGCAGTTATTTTTATGAGAGTGTATCA-AATTAATAAATA 13194 Query 1088 TTGAATTTTATATCATGAAATTCCTTTACATACATTGTTTGCTGTAGTTTATTATATAAT 1147 ||||||||||| |||||| |||| ||||| || |||||||| | | ||| ||||| Sbjct 13195 TTGAATTTTATTTCATGATATTCAAGTACATCCACTGTTTGCTCAATTACATTGAATAAT 13254 Query 1148 ACATGATCTACAGCTCTAATTACATTGTTTATTGAAATCACTCCTAAATTATCTAAATAC 1207 |||| |||||||||||||| | |||||| || ||| || ||||| |||||| | Sbjct 13255 ACATTGTCTACAGCTCTAATAATATTGTTAATACTAATAACACCTAATCGGTCTAAAAAT 13314 Query 1208 TGCATCACTTGTGTTTTAAATACTCTTAAGAAACGCCATGTCTGAGGATGTAAGCGAGTC 1267 | ||| || | ||||||||||||||||||| ||||| ||||| |||| |||||| Sbjct 13315 TTCATTACACGAAATTTAAATACTCTTAAGAAAACGTATGTCGGAGGACGTAAACGAGTC 13374 Query 1268 CAGACTTCGAAAATCA-GAAAGCATTTGTGAATCCCCAGCTGAGTTCTCAGGTTGTAGTT 1326 | || | ||| | | |||||| |||||||| ||| | | |||||||||| ||| Sbjct 13375 CTGATCTTGAAGTTGAGGAAAGC-TTTGTGAAGATTCAGTTCCTTCCTCAGGTTGTGGTT 13433 Query 1327 GAATTGTATCTGGATT 1342 |||| | || || ||| Sbjct 13434 GAATCGAATTTGTATT 13449 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 8793540909305