Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Solanum_20melongena_20[genbank_20GCA_5F000787875.1_202014-09-30] 33,873 sequences; 833,080,760 total letters Query= NC_008374.1 Length=2744 Score E Sequences producing significant alignments: (Bits) Value seq19028 239 8e-60 >seq19028 Length=31091 Score = 239 bits (264), Expect = 8e-60 Identities = 304/417 (73%), Gaps = 1/417 (0%) Strand=Plus/Plus Query 1584 AATGGCTCCGTGAGGGTGACGAATGTTGCATTTTTTAATGCCCAGTTTTTGAGTGCTGCG 1643 ||||| | |||| |||| |||| |||||| | || | ||| ||||| | | Sbjct 13768 AATGGTTGTGTGATGGTGTAGAATTCTGCATTATGCAAAGACCAATTTTTTAATTTAATA 13827 Query 1644 TTCTTTTCTTCGTCCAAGTATTCTTTATATGATGATGTTGGTCCTGGATTGCAAAGGAAG 1703 || ||||| || || | | | |||||||| || || || || |||||||| | |||| Sbjct 13828 TTTTTTTCCTCCTCGAGGAACTCTTTATAGCTGGAAGTAGGACCAGGATTGCACAAGAAG 13887 Query 1704 ATTGACGGGATACCGCCTTTAATTTGAATTGGCTTTCCATACTTTGTGTTGCTTTGCCAG 1763 |||| ||| || || || || || | | ||| |||| || ||| ||||| ||| Sbjct 13888 ATTGTCGGTATCCCACCCTTTATCTTTACAGGCCTTCCGTATTTTACCTTGCTGGACCAA 13947 Query 1764 TCCCTTTGGGCCCCCATGAATTCTTTAAAATGCTTTAGATAGTGGGGATCTACGTCATCA 1823 | |||||||||||||| || |||||||| ||||||||||| || ||||| |||| |||| Sbjct 13948 TTGCTTTGGGCCCCCATAAACTCTTTAAAGTGCTTTAGATAATGCGGATCGACGTTATCA 14007 Query 1824 ATGACGTTATACCAAGCATCATTGCTGTATACTTTTGGACTGAGATCTAGATGGCCACAC 1883 |||| ||||||||| |||| ||| || | ||| | | | ||||| ||| || || Sbjct 14008 ATGATGTTATACCAGGCATTATTTGAATAAATTTTATTATTCAAATCTAAATGACCGCAT 14067 Query 1884 AAATAATTGTGTAGACCCAGAGACCTTGCCCACGTCGTCTTCCCTGTACGACTATCACCC 1943 | ||||| ||| | || | ||| ||||||||| ||||||||||| | | |||||| Sbjct 14068 AGGTAATTATGTGGTCCTAAAGATCTTGCCCACTCTGTCTTCCCTGTTCTAGACTCACCC 14127 Query 1944 TCTATGACAATACTATTGGGTC-TCCATGGCCGCGCAGCTGCATTCATGACATTTTC 1999 || ||||||||||| ||||||| | ||||||||||||| |||| | | |||||||| Sbjct 14128 TCAATGACAATACTCTTGGGTCGTTAATGGCCGCGCAGCGGCATCCCTAACATTTTC 14184 Score = 152 bits (168), Expect = 9e-34 Identities = 260/369 (70%), Gaps = 11/369 (3%) Strand=Plus/Plus Query 958 CATACTGAGAATGCTCTTTTATTGTATATGGCATGTACTCATGCTAGTAATCCAGTGTAT 1017 |||||||| ||||| || |||||||| | |||||||| |||||| || ||| Sbjct 13084 CATACTGAAAATGCA---TTGTTGTATATTAGTTCAACTCATGCATCTAATCCTGTATAT 13140 Query 1018 GCTACTTTGAAAATCAGGATCTATTTTTATGATTCTGT-TCAGAATTAATAAAGATTGAA 1076 |||| ||| || | | ||||||||||| ||| ||| |||||||||| |||||| Sbjct 13141 TGTACTATGAGAACACGCAGTTATTTTTATGAGAGTGTATCA-AATTAATAAATATTGAA 13199 Query 1077 TTTTATTATACTTGACAATTTTGTT--TCAATTGTCCCTTCCAATACATCATACAATACA 1134 ||||||| | ||| | | || || | ||| || | ||||| | |||||| Sbjct 13200 TTTTATTTCA--TGATATTCAAGTACATCCACTGTTTGCTCAATTACATTGAATAATACA 13257 Query 1135 TGTGAAATTGCTCTAATTACATTGTTGATACTAATCACTCCTAAATTTCCTAAATATTTC 1194 | | |||||||| | |||||| |||||||| || ||||| ||||| ||||| Sbjct 13258 TTGTCTACAGCTCTAATAATATTGTTAATACTAATAACACCTAATCGGTCTAAAAATTTC 13317 Query 1195 AT-ACATTGATACTTAAATACTCTTAAGAAATGCGAGGTCTGAGGATGTAAACGAGTCCA 1253 || ||| || | |||||||||||||||||| | ||| ||||| |||||||||||| Sbjct 13318 ATTACAC-GAAATTTAAATACTCTTAAGAAAACGTATGTCGGAGGACGTAAACGAGTCCT 13376 Query 1254 GATTTGGCAGGTTAGAAAACATTTGTGTATCCCCAACGCTTTCCTCAGGTTGTAATTGAA 1313 ||| | | || | || ||| |||||| | || | ||||||||||||| ||||| Sbjct 13377 GATCTTGAAGTTGAGGAAAGCTTTGTGAAGATTCAGTTCCTTCCTCAGGTTGTGGTTGAA 13436 Query 1314 TTGTATTTG 1322 | | ||||| Sbjct 13437 TCGAATTTG 13445 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 8668878941780