Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Solanum_20melongena_20[genbank_20GCA_5F000787875.1_202014-09-30] 33,873 sequences; 833,080,760 total letters Query= NC_008559.1 Length=2728 Score E Sequences producing significant alignments: (Bits) Value seq19028 251 1e-63 >seq19028 Length=31091 Score = 251 bits (278), Expect = 1e-63 Identities = 500/736 (68%), Gaps = 21/736 (3%) Strand=Plus/Plus Query 1591 GCATTCTTGAGAGTCCAGTTCTTTAATGCTGTGtttttttCCTCGTTGAGGAATTCTTTA 1650 ||||| | | || ||| || |||||| | ||||||||||| | |||||| |||||| Sbjct 13795 GCATTATGCAAAGACCAATTTTTTAATTTAATATTTTTTTCCTCCTCGAGGAACTCTTTA 13854 Query 1651 TAACTGCTGTTTGGACCAGGATTGCACAGGAAGATTGTCGGTATCCCGCCTTTAATTTGA 1710 || ||| | |||||||||||||||| |||||||||||||||||| || || || | Sbjct 13855 TAGCTGGAAGTAGGACCAGGATTGCACAAGAAGATTGTCGGTATCCCACCCTTTATCTTT 13914 Query 1711 ACTGGCTTTCCGTACTTTGTGTTGCTTTGCCAGTCCCTTTGGGCCCCCATGAATTCCTTG 1770 || ||| ||||||| ||| ||||| ||| | |||||||||||||| || || || Sbjct 13915 ACAGGCCTTCCGTATTTTACCTTGCTGGACCAATTGCTTTGGGCCCCCATAAACTCTTTA 13974 Query 1771 AAGTGCTTGAGGAAGTGCGGATCTACGTCATCAATGACGTTGTACCAGGCTTCATTGCTG 1830 |||||||| || | |||||||| |||| |||||||| ||| |||||||| | ||| Sbjct 13975 AAGTGCTTTAGATAATGCGGATCGACGTTATCAATGATGTTATACCAGGCATTATTTGAA 14034 Query 1831 TAGACCTTTGGGCTTAGATCCAGATGTCCACACAGATAATTGTGTGGGCCTAGTGACCTA 1890 || | || | | ||| | ||| || || || ||||| ||||| |||| || || Sbjct 14035 TAAATTTTATTATTCAAATCTAAATGACCGCATAGGTAATTATGTGGTCCTAAAGATCTT 14094 Query 1891 GCCCACATCGTCTTCCCGGTACGACTGTCTCCCTCAATCACTATACTCATTGGTC-TTAG 1949 |||||| |||||||| || | | || |||||||| || |||||| | |||| ||| Sbjct 14095 GCCCACTCTGTCTTCCCTGTTCTAGACTCACCCTCAATGACAATACTCTTGGGTCGTTAA 14154 Query 1950 GGGCCGCGCAGCGGCGTCGACGACGTTCTCCGACACCCACTCTTCAAGTTCTTCTGGAAC 2009 |||||||||||||| || || || || | |||| |||| Sbjct 14155 TGGCCGCGCAGCGGCATCCCTAACATTTTCAGCTGCCCAGCACTCAA------------- 14201 Query 2010 TTGATCGAAAGAAGAAGAAAGAAAAGGAGAAACATAAACCTCCAACGGAGGTGTGAAGAT 2069 ||| | ||| |||||| || ||||||| ||||||| || || || |||| || Sbjct 14202 TTG-TTGAAGGAAGAACAACTAAAAGGACTAACATAAGGTTCAGGAGGGGGCATGAATAT 14260 Query 2070 CCTTTCTAAATTAGCATTTAGATTATGAAATTGTAAAACATAATCTTTG--GGTGCTAAC 2127 | ||||| || | | || ||||||| |||| ||| | || ||||| || | Sbjct 14261 TCGATCTAATTTTGGAACTATATTATGATATTG--AAATAGAAACTTTGCTGGCATTTTT 14318 Query 2128 TCTTTAATCACATTAAGAGCCTC-TGACTTACTGCCTGTGTTAAGTGCTGCGGCGTAAGC 2186 ||| |||| | | ||| || || | | || || |||| ||| | || | | Sbjct 14319 TCTCTAATAATAGAAAGCGCTTCTTCAATTGATGTAGCACTTAA-CGCTTCTGCAGATAC 14377 Query 2187 ATCATTGGCTGATTGTTGTCCCCCTCTTGCAGATCGTCCGTCGATCTGAAACTCTCCCCA 2246 |||||| | || ||| || ||||| ||||||||||| ||||| ||||| | ||||| Sbjct 14378 ATCATTTGTTGTATGTGAACCTCCTCTAGCAGATCGTCCATCGATTTGAAAATTGCCCCA 14437 Query 2247 TTCGAGGGTGTCTCCGTCCTTGTGGATGTAGGACTTGACGTCGGAGCTGGATTTAACTCC 2306 ||| | || | ||| || |||||| ||| || || || |||||| | Sbjct 14438 GTCGGTGTAATCACAGTCTTTCGCGATGTATTTCTTAACATCTGAAGATGATTTAGCGGA 14497 Query 2307 CTGGATGTTTGGATGG 2322 |||| |||||| ||| Sbjct 14498 TTGGAAGTTTGGGTGG 14513 Score = 107 bits (118), Expect = 3e-20 Identities = 286/433 (66%), Gaps = 7/433 (2%) Strand=Plus/Plus Query 941 CATACTGAGAATGCGTTGTTGTTGTATATGGCATGTACTCATGCCAGTAACCCTGTGTAT 1000 |||||||| ||||| |||| ||||||| | |||||||| ||| ||||| ||| Sbjct 13084 CATACTGAAAATGCATTGT---TGTATATTAGTTCAACTCATGCATCTAATCCTGTATAT 13140 Query 1001 GCTACTTTGAAAATCAGGATCTACTTCTATGATTCTCTTCAAAATTAATAAAGATCGAAT 1060 |||| ||| || | | || || ||||| | | ||||||||||| || |||| Sbjct 13141 TGTACTATGAGAACACGCAGTTATTTTTATGAGAGTGTATCAAATTAATAAATATTGAAT 13200 Query 1061 TTTATTTC-TGA-ATTCATGTCTACATACATTGTTTGTTCTATTTTGTTCCATAATACAT 1118 |||||||| ||| ||||| | ||||| || |||||| || ||| || ||||||||| Sbjct 13201 TTTATTTCATGATATTCAAG--TACATCCACTGTTTGCTCAATTACATTGAATAATACAT 13258 Query 1119 GATTGACAGCTCTAATAATTGAATTAATTGAGATTACACCGAGATTGTTGAGATATTTGA 1178 | |||||||||||||| ||||| || ||||| | || | | |||| | Sbjct 13259 TGTCTACAGCTCTAATAATATTGTTAATACTAATAACACCTAATCGGTCTAAAAATTTCA 13318 Query 1179 GGACTTGGGTTTTGAATACCCTTAAGAAAAGACCAATCGGAGGGTGTAAGGTCGTCCAGA 1238 || | ||| ||||| |||||||||| ||||||| |||| |||| || Sbjct 13319 TTACACGAAATTTAAATACTCTTAAGAAAACGTATGTCGGAGGACGTAAACGAGTCCTGA 13378 Query 1239 TTCGGTAGGTCAGAAAACACTTGTGCACTCCCAGAGCTCTCCGAAGGTTGTAGTTGAATT 1298 | | || | || ||| ||||| | ||| | ||| ||||||| ||||||| Sbjct 13379 TCTTGAAGTTGAGGAAAGCTTTGTGAAGATTCAGTTCCTTCCTCAGGTTGTGGTTGAATC 13438 Query 1299 GGATTCTGATTGTTATGATGTCCATGTTCATCGTGAATGGACGGTTGTCGTGGCTTAGGA 1358 | ||| ||| || ||||| | || | ||| | | | |||| | |||| Sbjct 13439 GAATTTGTATTTCGATTATGTCGGTTGTCGAATTTGTTGGTCTGAGATTGTGGTTGAGGA 13498 Query 1359 TCTTGAAATAGAG 1371 |||||||||| || Sbjct 13499 TCTTGAAATATAG 13511 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 8617697368692