Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Solanum_20melongena_20[genbank_20GCA_5F000787875.1_202014-09-30] 33,873 sequences; 833,080,760 total letters Query= NC_008779.1 Length=2611 Score E Sequences producing significant alignments: (Bits) Value seq19028 145 1e-31 >seq19028 Length=31091 Score = 145 bits (160), Expect = 1e-31 Identities = 262/377 (69%), Gaps = 17/377 (5%) Strand=Plus/Plus Query 1510 TTTTCCTCTTTGTCGAGGAAATCTTTATAGCTTGCACCCTCACCTGGATTGCAAAGCACG 1569 |||||||| | ||||||| ||||||||||| | | ||| |||||||| | | | Sbjct 13831 TTTTCCTCCT---CGAGGAACTCTTTATAGCTGGAAGTAGGACCAGGATTGCACAAGAAG 13887 Query 1570 ATTGCTGGGATACCTCCTTTTATTTGAACTGGCTTGCCGTACTTGCAATTTGACTG--CC 1627 |||| || || || || ||||| | || ||| | ||||| || | ||| ||| || Sbjct 13888 ATTGTCGGTATCCCACCCTTTATCTTTACAGGCCTTCCGTATTTT-ACCTTG-CTGGACC 13945 Query 1628 AGTCTTTCTGGGCCCCCAGCAATTCTTTCCAGTGCTTTAGCTTTAGATAGTGCGGTGCGA 1687 | | | |||||||||| || ||||| |||||||||| ||| ||||| ||| Sbjct 13946 AATTGCTTTGGGCCCCCATAAACTCTTTAAAGTGCTTTAG------ATAATGCGGATCGA 13999 Query 1688 CGTCATCAATGACGTTATACTCCACGTCATTTGAGTATACCCGGTGATTGAAGTCCAGAT 1747 ||| |||||||| ||||||| | | |||||| || | | ||| || || | || Sbjct 14000 CGTTATCAATGATGTTATACCAGGCATTATTTGAATAAATTTTATTATTCAAATCTAAAT 14059 Query 1748 GTCCACTGAGGTAATTATGTGGGCCTAACGCACGAGCCCACATCGTCTTCCCTGTCCTTG 1807 | || | |||||||||||||| ||||| | | |||||| ||||||||||| || | Sbjct 14060 GACCGCATAGGTAATTATGTGGTCCTAAAGATCTTGCCCACTCTGTCTTCCCTGTTCTAG 14119 Query 1808 AATCACCTTCAACTATGAGACTTACTGGTCTCTCA-GGCCGCGCAGCGGCACCTCTCCCA 1866 | ||||| |||| | | ||| |||| | | ||||||||||||||| | || | Sbjct 14120 ACTCACCCTCAATGACAATACTCTTGGGTCGTTAATGGCCGCGCAGCGGCATC---CCTA 14176 Query 1867 AAATAATCATCTGCCCA 1883 | || ||| ||||||| Sbjct 14177 ACATTTTCAGCTGCCCA 14193 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 8243432115486