Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Solanum_20melongena_20[genbank_20GCA_5F000787875.1_202014-09-30] 33,873 sequences; 833,080,760 total letters Query= NC_008793.1 Length=2762 Score E Sequences producing significant alignments: (Bits) Value seq19028 197 2e-47 >seq19028 Length=31091 Score = 197 bits (218), Expect = 2e-47 Identities = 540/822 (66%), Gaps = 34/822 (4%) Strand=Plus/Plus Query 1682 GACGTTGGGCCTGGATTGCAGAGGAAGATTGTTGGGATACCACCTTTAATTTGAATTGGT 1741 || || || || |||||||| | ||||||||| || || ||||| || || | | || Sbjct 13861 GAAGTAGGACCAGGATTGCACAAGAAGATTGTCGGTATCCCACCCTTTATCTTTACAGGC 13920 Query 1742 TTCCCGTACTTGGTGTTGCTTTGCCAGTCCCTTTGGGCCCCCATGAATTCCTTAAAGTGC 1801 | ||||| || ||||| ||| | |||||||||||||| || || ||||||||| Sbjct 13921 CTTCCGTATTTTACCTTGCTGGACCAATTGCTTTGGGCCCCCATAAACTCTTTAAAGTGC 13980 Query 1802 TTTAGGTAGTGGGGATCCACGTCATCAATGACGTTGTACCAGGCCTCGTTGCTGTAAACC 1861 ||||| || || ||||| |||| |||||||| ||| |||||||| | || |||| Sbjct 13981 TTTAGATAATGCGGATCGACGTTATCAATGATGTTATACCAGGCATTATTTGAATAAATT 14040 Query 1862 TTGGGGCTTAAGTCAAGGTGGCCGCAAAGGTAGTTGTGATGTGGGTCCAATGACCTGGCC 1921 || | || || | || ||||| ||||| || |||||| | || || || ||| Sbjct 14041 TTATTATTCAAATCTAAATGACCGCATAGGTAATT---ATGTGGTCCTAAAGATCTTGCC 14097 Query 1922 CACATGGTCTTCCCTGTCCTGCTATCTCCCTCAATCACAATACTCATGGG-CCTCCATGG 1980 ||| ||||||||||| || || |||||||| ||||||||| |||| | | |||| Sbjct 14098 CACTCTGTCTTCCCTGTTCTAGACTCACCCTCAATGACAATACTCTTGGGTCGTTAATGG 14157 Query 1981 CCGCGCAGCGGAATCCTTGATGTTCTCTGAAACCCAGCACTCAAGTTCTTCTGGAACTTG 2040 ||||||||||| |||| | | || || | |||||||||||| ||| Sbjct 14158 CCGCGCAGCGGCATCCCTAACATTTTCAGCTGCCCAGCACTCAA-------------TTG 14204 Query 2041 ATCAAAAGAGGAAGATAAAAAAGGAGAAACAAATGGCTCCAAAGTAGGAGCA--AAAATC 2098 | || || ||| | ||||||| |||| | || || | | || ||| || || Sbjct 14205 -TTGAAGGAAGAACAACTAAAAGGACTAACATAAGGTTC--AGGAGGGGGCATGAATATT 14261 Query 2099 CTATCTANNNNNNNNNNNNNNNTATGAAATTGTAAAACAAAATCTTTG--GGAGCTTTCT 2156 | ||||| ||||| |||| ||| | || ||||| || ||| | Sbjct 14262 CGATCTAATTTTGGAACTATATTATGATATTG--AAATAGAAACTTTGCTGGCATTTTTT 14319 Query 2157 CCCTTAATATACAGAGTGCCGATGACTTAGATCCTGAGTTGATTGCCTCGGCATACGCGT 2216 | || | ||| | || || | | ||| | | | || || ||| | | | Sbjct 14320 CTCTAATAATAGAAAGCGCTTCTTCAATTGATGTAGCACTTAACGCTTCTGCAGATACAT 14379 Query 2217 CGTTGGCAGATTGGCAACCTCCTCTAGCTGATCTTCCATCGACTTGGAAAATTCCAAAGT 2276 | || | | || ||||||||||||| |||| |||||||| ||| ||| | || ||| Sbjct 14380 CATTTGTTGTATGTGAACCTCCTCTAGCAGATCGTCCATCGATTTGAAAATTGCCCCAGT 14439 Query 2277 CAAGGATGTCTCCGTCTTTCTCCATGTAGGTCTTGACATCTGACGAGCTCTTAGCTCCCT 2336 | | || | ||||||| | ||||| |||| |||||||| || ||||| | Sbjct 14440 CGGTGTAATCACAGTCTTTCGCGATGTATTTCTTAACATCTGAAGATGATTTAGCGGATT 14499 Query 2337 GAATGTTTGGATGGAAATGTGCTGACCTAGT-TGGGGAT--ACGAGATCGAAGAATCTTT 2393 | | |||||| ||| ||||| || ||||| | |||| | || ||||||| ||| Sbjct 14500 GGAAGTTTGGGTGG-TATGTGGTG--CTAGTATTAGGATGGATGATATCGAAGTGTCTAG 14556 Query 2394 GATTTGTGCATTGATATTTCCCTTCGAATTGGATGAGGATGTGGAGATGAGGGCTCCCAT 2453 | ||| | |||| || ||||||||||| || ||| ||| |||| ||||| Sbjct 14557 GGTTTCTAAATTGTGCCTTGCCTTCGAATTGAATAAGGGCATGGCTATGAAATTCCCCAT 14616 Query 2454 CTTCGTGTAATTCTCTGCAGATTCGGATGAACAATTTATTTG 2495 | | |||| |||| |||| || | |||| |||||||| Sbjct 14617 CCTGGTGTTTTTCTTGACAGACTCTAA--AACAGTTTATTTG 14656 Score = 118 bits (130), Expect = 2e-23 Identities = 255/378 (67%), Gaps = 5/378 (1%) Strand=Plus/Plus Query 966 ACTGAAAATGCTTTGTTATTGTATATGGCTTGTACTCATGCCAGTAATCCAGTGTATGCT 1025 ||||||||||| ||||| |||||| || |||||||| |||||| || ||| | Sbjct 13087 ACTGAAAATGCATTGTT---GTATATTAGTTCAACTCATGCATCTAATCCTGTATATTGT 13143 Query 1026 ACCCTAAAAATCAG-AGTGTATTTCTACGATTCAGTACAGAATTAATAAAGTTTGAATTT 1084 || | | || | ||| ||||| || || ||| |||||||||| |||||||| Sbjct 13144 ACTATGAGAACACGCAGT-TATTTTTATGAGAGTGTATCAAATTAATAAATATTGAATTT 13202 Query 1085 TATATCAGTCAATTGTTGTACATACTCCGTTCCTTCTAATACATCATACAATACATAATC 1144 ||| ||| ||| |||||| | | ||| || | ||||| | ||||||| || Sbjct 13203 TATTTCATGATATTCAAGTACATCCACTGTTTGCTCAATTACATTGAATAATACATTGTC 13262 Query 1145 AACTGCCCTAATTACATTGTTAATTGAAATTACACCCAAATTATCTAAATACATCAACAC 1204 || || ||||| | ||||||||| ||| ||||| || |||||| | ||| || Sbjct 13263 TACAGCTCTAATAATATTGTTAATACTAATAACACCTAATCGGTCTAAAAATTTCATTAC 13322 Query 1205 TTGTTCCCTAAATAAATTCAAGAAATGCGAGGTCTGATGACGTGAGAGAGTCCAAATCTT 1264 | |||||| | |||||| | ||| || ||||| | |||||| ||||| Sbjct 13323 ACGAAATTTAAATACTCTTAAGAAAACGTATGTCGGAGGACGTAAACGAGTCCTGATCTT 13382 Query 1265 GAAAGTCAGGAAGCACTTGTGTAAATCCAGCTGAGACCGTAGGTTGTGGTTGAATTGGAT 1324 ||| | ||||| ||||| | || ||| | || ||||||||||||||| | || Sbjct 13383 GAAGTTGAGGAAAGCTTTGTGAAGATTCAGTTCCTTCCTCAGGTTGTGGTTGAATCGAAT 13442 Query 1325 CTGTACTGTGATTATGTC 1342 |||| | ||||||||| Sbjct 13443 TTGTATTTCGATTATGTC 13460 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 8726458211504