Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Solanum_20melongena_20[genbank_20GCA_5F000787875.1_202014-09-30] 33,873 sequences; 833,080,760 total letters Query= NC_008794.1 Length=2745 Score E Sequences producing significant alignments: (Bits) Value seq19028 250 4e-63 >seq19028 Length=31091 Score = 250 bits (276), Expect = 4e-63 Identities = 272/360 (76%), Gaps = 1/360 (0%) Strand=Plus/Plus Query 1623 CCAATTTTTAAGTGCGTTGTTCTTTTCTTCATCCAGGAATTCTTTATAGCTGGAAGTGGG 1682 ||||||||| | | | || ||||| || || ||||| ||||||||||||||||| || Sbjct 13809 CCAATTTTTTAATTTAATATTTTTTTCCTCCTCGAGGAACTCTTTATAGCTGGAAGTAGG 13868 Query 1683 TCCTGGATTGCAGAGGAAGATAGTGGGAATTCCGCCTTTAATTTGAACTGGCTTTCCGTA 1742 || |||||||| | |||||| || || || || || || || | || ||| ||||||| Sbjct 13869 ACCAGGATTGCACAAGAAGATTGTCGGTATCCCACCCTTTATCTTTACAGGCCTTCCGTA 13928 Query 1743 TTTAGTGTTGCTTTGCCAGTCCCTTTGGGCCCCCATGAATTCTTTAAAGTGTTTTAGGTA 1802 ||| ||||| ||| | |||||||||||||| || ||||||||||| ||||| || Sbjct 13929 TTTTACCTTGCTGGACCAATTGCTTTGGGCCCCCATAAACTCTTTAAAGTGCTTTAGATA 13988 Query 1803 GTGCGGATCTACGTCATCAATGACGTTGAACCAGGCATCATTGCTGTACACTTTAGGGCT 1862 |||||||| |||| |||||||| ||| ||||||||| ||| || | |||| | Sbjct 13989 ATGCGGATCGACGTTATCAATGATGTTATACCAGGCATTATTTGAATAAATTTTATTATT 14048 Query 1863 CAGATCTAGATGTCCACACAAATAATTGTGTGGTCCTAATGACCTGGCCCACATGGTCTT 1922 || ||||| ||| || || | ||||| ||||||||||| || || |||||| ||||| Sbjct 14049 CAAATCTAAATGACCGCATAGGTAATTATGTGGTCCTAAAGATCTTGCCCACTCTGTCTT 14108 Query 1923 CCCCGTCCTGCTATCACCCTCTATGACTATACTTACCGGTC-TCAATGGCCGCGCAGCGG 1981 ||| || || |||||||| ||||| ||||| |||| | |||||||||||||||| Sbjct 14109 CCCTGTTCTAGACTCACCCTCAATGACAATACTCTTGGGTCGTTAATGGCCGCGCAGCGG 14168 Score = 116 bits (128), Expect = 6e-23 Identities = 254/380 (67%), Gaps = 3/380 (1%) Strand=Plus/Plus Query 959 CATACTGAAAATGCTTTGTTGTTGTATATGGCATGTACCCATGCCTCTAATCCTGTGTAT 1018 |||||||||||||| |||| ||||||| | || ||||| ||||||||||| ||| Sbjct 13084 CATACTGAAAATGCATTGT---TGTATATTAGTTCAACTCATGCATCTAATCCTGTATAT 13140 Query 1019 GCCACTTTGAAAGTCAGGAGTTATTTTTATGACTCAGTGACTAATTAATAAAGATTAAAT 1078 ||| ||| | | |||||||||||||| || | |||||||||| ||| ||| Sbjct 13141 TGTACTATGAGAACACGCAGTTATTTTTATGAGAGTGTATCAAATTAATAAATATTGAAT 13200 Query 1079 TTTATTGAATAAGATTGGTCTACATATACAATGTGTTCTAATACATTCCATAATACATGA 1138 |||||| || | ||| ||||| || | || || | |||||| ||||||||| Sbjct 13201 TTTATTTCATGATATTCAAGTACATCCACTGTTTGCTCAATTACATTGAATAATACATTG 13260 Query 1139 TCAACCGTACGTATTACATTATTCAAACTAATTACACCCAAATTATTAAGAAACTTCAAA 1198 || || | | || | ||| || | |||||| ||||| || | | ||| |||| Sbjct 13261 TCTACAGCTCTAATAATATTGTTAATACTAATAACACCTAATCGGTCTAAAAATTTCATT 13320 Query 1199 ACTTGTGTCCTAAATACTCTTAAGAAACGACCAGTCTGAGGCTGTGAAGTCATCCAGATT 1258 || | ||||||||||||||||| ||| |||| || || ||| ||| Sbjct 13321 ACACGAAATTTAAATACTCTTAAGAAAACGTATGTCGGAGGACGTAAACGAGTCCTGATC 13380 Query 1259 CGGTAGACTAGAAAACACTTGTGTATCCCCAACGCTTTCCGCAGGTTGTAGTTGAACTGT 1318 | || || ||| ||||| | || | |||| |||||||| |||||| | Sbjct 13381 TTGAAGTTGAGGAAAGCTTTGTGAAGATTCAGTTCCTTCCTCAGGTTGTGGTTGAATCGA 13440 Query 1319 ATTTGGATGGTGATTATGTC 1338 ||||| || ||||||||| Sbjct 13441 ATTTGTATTTCGATTATGTC 13460 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 8672077790098