Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Solanum_20melongena_20[genbank_20GCA_5F000787875.1_202014-09-30] 33,873 sequences; 833,080,760 total letters Query= NC_009030.1 Length=2762 Score E Sequences producing significant alignments: (Bits) Value seq19028 253 4e-64 >seq19028 Length=31091 Score = 253 bits (280), Expect = 4e-64 Identities = 594/885 (67%), Gaps = 31/885 (4%) Strand=Plus/Plus Query 1591 AATGGCTGTTGGATGGTGAAGAAGACCGCATTTTTAATTGCCCAGGCCTTTAATGGTGCG 1650 ||||| ||| ||||||| |||| | ||||| | | | ||| |||||| Sbjct 13768 AATGGTTGTGTGATGGTGTAGAATTCTGCATTATGCAAAGACCAATTTTTTAATTTAATA 13827 Query 1651 TTCTTTTCCTCATCCAAGTACTCTTTATATGATGAAGTGGGTCCTGGATTGCAGAGGAAG 1710 || |||||||| || | | |||||||||| ||||| || || |||||||| | |||| Sbjct 13828 TTTTTTTCCTCCTCGAGGAACTCTTTATAGCTGGAAGTAGGACCAGGATTGCACAAGAAG 13887 Query 1711 ATTGCCGGGATACCTCCTTTAATTTGAATTGGTTTCCCGTACTTTGTGTTGCTTTGCCAG 1770 |||| ||| || || || || || | | || | ||||| ||| ||||| ||| Sbjct 13888 ATTGTCGGTATCCCACCCTTTATCTTTACAGGCCTTCCGTATTTTACCTTGCTGGACCAA 13947 Query 1771 TCCCTTTGTGCGCCCATGAATTCTTTAAAGTGCTTTAGATAATGAGGATCGACGTCATCA 1830 | ||||| || ||||| || ||||||||||||||||||||||| |||||||||| |||| Sbjct 13948 TTGCTTTGGGCCCCCATAAACTCTTTAAAGTGCTTTAGATAATGCGGATCGACGTTATCA 14007 Query 1831 ATGACGTTGTACCAAGCATTATTACTGTACACCTTTGGACTGAGGTCAAGATGACCACAC 1890 |||| ||| ||||| |||||||| || | || | | | || | |||||| || Sbjct 14008 ATGATGTTATACCAGGCATTATTTGAATAAATTTTATTATTCAAATCTAAATGACCGCAT 14067 Query 1891 AAATAATTGTGTGGTCCTAATGACCTAGCCCACATTGTCTTGCCGGTACGACTATCCCCT 1950 | ||||| ||||||||||| || || |||||| |||||| || || | | || || Sbjct 14068 AGGTAATTATGTGGTCCTAAAGATCTTGCCCACTCTGTCTTCCCTGTTCTAGACTCACCC 14127 Query 1951 TCAATCACAATACTCATGGGTC-TCAATGGCCGCGCAGCGGCAGTGACAACATTCTGTGC 2009 ||||| ||||||||| |||||| | |||||||||||||||||| |||||| | || Sbjct 14128 TCAATGACAATACTCTTGGGTCGTTAATGGCCGCGCAGCGGCATCCCTAACATTTTCAGC 14187 Query 2010 CGCCCACTCTTCAAGTTCCTCTGGAACTTGATCGAACGAAGAACATAAGAAAGGTGAAAC 2069 ||||| || ||| | ||| | ||| |||||||| ||||| ||| Sbjct 14188 TGCCCA----GCA-----CTC----AATTG-TTGAAGGAAGAACAACTAAAAGGACTAAC 14233 Query 2070 ATATTCCTCCAACGGAGGTGTAAAAATCCTATCTAAATT----ACTTTTCAAATTATGAT 2125 ||| || || || | || || | |||||| || ||| | |||||||| Sbjct 14234 ATAAGGTTCAGGAGGGGGCATGAATATTCGATCTAATTTTGGAACT----ATATTATGAT 14289 Query 2126 ACTGAAAAATAAAATCTTTAGGGAGTTTCTCCCTAATAATAGCCAGAGCGGCTTCAGCGG 2185 | ||||| | ||| | | || | ||| || |||||||||| || || ||||| | Sbjct 14290 ATTGAAATAGAAACTTTGCTGGCATTTTTTCTCTAATAATAGAAAGCGCTTCTTCAATTG 14349 Query 2186 ACCCTGCGTTTAATGCCTCGGCGCATGCGTCGTTAGCATTATGGCAGCCTCCTCTAGCAC 2245 | || |||| || || || || | || || | |||| | |||||||||||| Sbjct 14350 ATGTAGCACTTAACGCTTCTGCAGATACATCATTTGTTGTATGTGAACCTCCTCTAGCAG 14409 Query 2246 TTCTGCCGTCGATCTGGAATTCCCCCCATTCGAGTG-CGTCTCCATCCTTGTCGATGTAG 2304 || || ||||| || || | ||||| ||| ||| || | || || ||||||| Sbjct 14410 ATCGTCCATCGATTTGAAAATTGCCCCAGTCG-GTGTAATCACAGTCTTTCGCGATGTAT 14468 Query 2305 GACTTGACGTCGGAGCTTGATTTAGCTCCCTGAATGTTCGGATGGAAATGTGTTGACCTG 2364 ||| || || || ||||||||| || | ||| || ||| ||||| || || Sbjct 14469 TTCTTAACATCTGAAGATGATTTAGCGGATTGGAAGTTTGGGTGG-TATGTGGTG--CTA 14525 Query 2365 GT-TGGGGAT--ACCAGGTCGAAGAATCTGTTATTTTTGCAGTTGAATTTTCCTTCGAAC 2421 || | |||| | | |||||| ||| ||| | | | || |||||||| Sbjct 14526 GTATTAGGATGGATGATATCGAAGTGTCTAGGGTTTCTAAATTGTGCCTTGCCTTCGAAT 14585 Query 2422 TGAATAAGCACGTGGAGATGAGGCTCCCCATCTTCGTGTAGTTCT 2466 |||||||| | ||| |||| |||||||| | |||| |||| Sbjct 14586 TGAATAAGGGCATGGCTATGAAATTCCCCATCCTGGTGTTTTTCT 14630 Score = 192 bits (212), Expect = 1e-45 Identities = 281/394 (71%), Gaps = 9/394 (2%) Strand=Plus/Plus Query 961 GAATCATACTGAGAATGCTCTGTTGTTGTATATGGCATGTACTCATGCCTCTAACCCTGT 1020 || ||||||||| ||||| ||||||||||| | |||||||| ||||| ||||| Sbjct 13080 GACTCATACTGAAAATGCA---TTGTTGTATATTAGTTCAACTCATGCATCTAATCCTGT 13136 Query 1021 GTATGCTACGTTGAAAATACGTATCTATTTCTATGATTCAGTTGGGAATTAATAAAGTTT 1080 ||| ||| ||| || ||| | ||||| ||||| || |||||||||| || Sbjct 13137 ATATTGTACTATGAGAACACGCAGTTATTTTTATGAGAGTGTATCAAATTAATAAATATT 13196 Query 1081 GAATTTTATATCATAATTTTGT--TCCACCCATAAAGTGCCATTGATTACATCAAACAAT 1138 ||||||||| |||| || || | || ||| ||| | ||||||| || ||| Sbjct 13197 GAATTTTATTTCATGATATTCAAGTACATCCACTGTTTGC--TCAATTACATTGAATAAT 13254 Query 1139 ACATATTCTATTGCTCTAATTACATTATTAATTGAAATTACACCAAGATTGTCTAAATAT 1198 |||| |||| |||||||| | ||| ||||| ||| ||||| | ||||||| || Sbjct 13255 ACATTGTCTACAGCTCTAATAATATTGTTAATACTAATAACACCTAATCGGTCTAAAAAT 13314 Query 1199 TTCCTAACTTGAGTCTTAAAGACTCTTAAGAAAAGACCAGTCTGAGGCTGTAAGGTTGTC 1258 ||| | || || ||||| ||||||||||||| ||| |||| |||| ||| Sbjct 13315 TTCATTACACGAAATTTAAATACTCTTAAGAAAACGTATGTCGGAGGACGTAAACGAGTC 13374 Query 1259 CAGATCTTGAAGGCCATGAAACACTTGTGAATCCCCAGTTCCTTCCTTAGGTTGTGGTTG 1318 | |||||||||| | |||| ||||||| |||||||||||| |||||||||||| Sbjct 13375 CTGATCTTGAAGTTGAGGAAAGCTTTGTGAAGATTCAGTTCCTTCCTCAGGTTGTGGTTG 13434 Query 1319 AATCGGATTTGTACTGTGATGATGTCGTGGTTGT 1352 ||||| ||||||| | ||| ||||| |||||| Sbjct 13435 AATCGAATTTGTATTTCGATTATGTC--GGTTGT 13466 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 8726458211504