Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Solanum_20melongena_20[genbank_20GCA_5F000787875.1_202014-09-30] 33,873 sequences; 833,080,760 total letters Query= NC_009354.1 Length=2753 Score E Sequences producing significant alignments: (Bits) Value seq19028 210 4e-51 >seq19028 Length=31091 Score = 210 bits (232), Expect = 4e-51 Identities = 270/369 (73%), Gaps = 5/369 (1%) Strand=Plus/Plus Query 1641 ATTCTTTTCCTCGTCCAGGAATTCTTTATAGCTGGAATTGGGCCCTGGATTGCAAAGGAA 1700 ||| |||||||| || ||||| ||||||||||||||| | || || |||||||| | ||| Sbjct 13827 ATTTTTTTCCTCCTCGAGGAACTCTTTATAGCTGGAAGTAGGACCAGGATTGCACAAGAA 13886 Query 1701 GATTGTTGGAATCCCGCCTTTAATTTGAACTGGCTTGCCGTACTTGGTATTGCTTTGCCA 1760 |||||| || ||||| || || || | || ||| | ||||| || ||||| ||| Sbjct 13887 GATTGTCGGTATCCCACCCTTTATCTTTACAGGCCTTCCGTATTTTACCTTGCTGGACCA 13946 Query 1761 GTCTCTCTGGGCCCCCATAAACTCTTTAAAGTGTTTGAGATAATGGGGATCAACGTCATC 1820 | || |||||||||||||||||||||||||| || |||||||| ||||| |||| ||| Sbjct 13947 ATTGCTTTGGGCCCCCATAAACTCTTTAAAGTGCTTTAGATAATGCGGATCGACGTTATC 14006 Query 1821 AATGACGTTGTACCAAGCGTCGTTACTGTATACCTTT--GGGCTGAGGTCCAGATGCCCA 1878 ||||| ||| ||||| || | || || ||| ||| | | || | ||| || Sbjct 14007 AATGATGTTATACCAGGCATTATT--TGAATAAATTTTATTATTCAAATCTAAATGACCG 14064 Query 1879 CAGAGATAATTATGTGGACCCAATGACCTGGCCCACATCGTCTTCCCCGTTCGACTGTCA 1938 || || ||||||||||| || || || || |||||| |||||||| |||| | ||| Sbjct 14065 CATAGGTAATTATGTGGTCCTAAAGATCTTGCCCACTCTGTCTTCCCTGTTCTAGACTCA 14124 Query 1939 CCTTCAACCACAAAACTGAAGGG-CCTCCGAGGCCGCGCAGCGGCCGCCACGACATTCTC 1997 || |||| |||| ||| ||| | | |||||||||||||| || ||||| || Sbjct 14125 CCCTCAATGACAATACTCTTGGGTCGTTAATGGCCGCGCAGCGGCATCCCTAACATTTTC 14184 Query 1998 ACACGCCCA 2006 | ||||| Sbjct 14185 AGCTGCCCA 14193 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 8697668576642