Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Solanum_20melongena_20[genbank_20GCA_5F000787875.1_202014-09-30] 33,873 sequences; 833,080,760 total letters Query= NC_009451.1 Length=2760 Score E Sequences producing significant alignments: (Bits) Value seq19028 518 6e-144 >seq19028 Length=31091 Score = 518 bits (574), Expect = 6e-144 Identities = 1140/1697 (67%), Gaps = 115/1697 (7%) Strand=Plus/Plus Query 940 GAATCATACTGAGAACGCTCTTATGTTGTATATGGCATGCACTCATGCCTCTAACCCCGT 999 || ||||||||| || || | ||||||||| | |||||||| ||||| || || Sbjct 13080 GACTCATACTGAAAATGCATT---GTTGTATATTAGTTCAACTCATGCATCTAATCCTGT 13136 Query 1000 GTATGCTACTCTGAAGATACGGATATATTTCTATGATTCTGTATCAAATTAATACAAAAG 1059 ||| |||| ||| | ||| | ||||| ||||| ||||||||||||||| | | Sbjct 13137 ATATTGTACTATGAGAACACGCAGTTATTTTTATGAGAGTGTATCAAATTAATAAATATT 13196 Query 1060 AAATTTTATTTCATGAGAGATCTCAA---CATCAATCGTGTTGTTTATTACATTGTACAA 1116 ||||||||||||||| | |||| |||| | || | | ||||||||| | || Sbjct 13197 GAATTTTATTTCATGATAT---TCAAGTACATCCACTGTTTGCTCAATTACATTGAATAA 13253 Query 1117 TACATGATCTACAGCCTTAAACACGTTATTAATACAGATAACACCTAAATTATCTAAATA 1176 ||||| |||||||| ||| | || ||||||| ||||||||||| |||||| | Sbjct 13254 TACATTGTCTACAGCTCTAATAATATTGTTAATACTAATAACACCTAATCGGTCTAAAAA 13313 Query 1177 ACGCAAAACTTGGGTCCTAAAGACCCGTAAGAAACGCCCAGTCTGAGGAGTTAAACTCGT 1236 || || | |||| || | ||||||| ||| ||||| ||||| || Sbjct 13314 TTTCATTACACGAAATTTAAATACTCTTAAGAAAACGTATGTCGGAGGACGTAAACGAGT 13373 Query 1237 CCAGATCCGGAAGGTTAGCCAACATTTGTGAAGTCCCAGTGCTCTCCTCAGGTTGTGGTT 1296 || |||| |||| | || || ||||||||| |||| | |||||||||||||||| Sbjct 13374 CCTGATCTTGAAGTTGAGGAAAGCTTTGTGAAGATTCAGTTCCTTCCTCAGGTTGTGGTT 13433 Query 1297 GAACCGGATCTGGATTGTTATTATGTCGTGGTTCCGGAAGAATGGTCGGTCC-AG---GT 1352 ||| || || || ||| ||||||||| ||| ||| | || |||| || || Sbjct 13434 GAATCGAATTTGTATTTCGATTATGTCG--GTTGTCGAAT--TTGTTGGTCTGAGATTGT 13489 Query 1353 GGCTTAGGATCCTGAAATAGAGGGG-ATTTGGAACCTCCCAGATAT-------------- 1397 || | |||||| ||||||| || | | | ||||| |||| Sbjct 13490 GGTTGAGGATCTTGAAATATAGAAACAGCTAATATTTCCCAAATATGTGGTTGACGTAAA 13549 Query 1398 -----ACACGCCATTCATTGCTTGAGCTGCAGTGATGGACTCCCCTGTGCGTGAATCCAT 1452 | ||||||||||| ||||| ||||||||| | |||||||||||| |||||| Sbjct 13550 CGACTAGACGCCATTCATCGCTTGTTGAGCAGTGATGTATTCCCCTGTGCGTATATCCAT 13609 Query 1453 GGTTGTGACAGTTGAGGCTGACGTAATAC-GAGCAGCCGCAGTTAAGGTCCACTCGTTTT 1511 | |||| | | | | |||| || || || || ||||| | |||| || Sbjct 13610 GACCAGAACAGCTAATATTTTTG-AATATTGAACATCCACAAGGCAGGTCTAGTCGTCTT 13668 Query 1512 CTGCGGAATGCTCTCCTCTTGGCTATTC-----TGT-------GTTGGA--CCTTG---- 1553 || | || | |||| ||||| ||| | ||| |||| ||||| Sbjct 13669 CTTCTGATTTGTCTCTTCTTGA-TATCCGGATATGTAAATGAGGTTGCTTTCCTTGTATA 13727 Query 1554 --------------ATTGGTA--------CCTGA--GAAGAGTGGCTCTTGGAGGGTGAT 1589 ||||| | |||| ||| | ||| | | || |||| Sbjct 13728 ATGTCTATGCATCCATTGGGATAACATTTCCTGCACGAATAATGGTTGTGTGATGGTGTA 13787 Query 1590 GAATTTTGCATTCTTGATGGCCCACTGCTTGAGTGCAGAATTCTTTTCTTCGTCCAAGAA 1649 ||||| |||||| | | | ||| | || | | | ||| ||||| || || | ||| Sbjct 13788 GAATTCTGCATTATGCAAAGACCAATTTTTTAATTTAATATTTTTTTCCTCCTCGAGGAA 13847 Query 1650 TTCTTTATAGCTGGAATTGGGCCCTGGATTGCAGAGGAAGATTGTTGGGATTCCGCCTTT 1709 ||||||||||||||| | || || |||||||| | ||||||||| || || || || || Sbjct 13848 CTCTTTATAGCTGGAAGTAGGACCAGGATTGCACAAGAAGATTGTCGGTATCCCACCCTT 13907 Query 1710 AATTTGAACTGGCTTTCCGTATTT---CGTGTTTGATTGCCAATCCCTCTGGGCCCCCAT 1766 || | || ||| |||||||||| | || | || ||||| || ||||||||||| Sbjct 13908 TATCTTTACAGGCCTTCCGTATTTTACCTTGCTGGA---CCAATTGCTTTGGGCCCCCAT 13964 Query 1767 GAATTCTTTAAAGTGTTTCAAATAATGCGGATCTACGTCATCAATGACGTTATACCAAGC 1826 || ||||||||||| || | |||||||||||| |||| |||||||| ||||||||| || Sbjct 13965 AAACTCTTTAAAGTGCTTTAGATAATGCGGATCGACGTTATCAATGATGTTATACCAGGC 14024 Query 1827 ATCGTTTGAATAAATTTTAGGGCTTAAATCCAAATGCCCACATAAATAATTATGTGGGCC 1886 || ||||||||||||||| | ||||| ||||| || |||| ||||||||||| || Sbjct 14025 ATTATTTGAATAAATTTTATTATTCAAATCTAAATGACCGCATAGGTAATTATGTGGTCC 14084 Query 1887 TAATGATCTGGCCCATAAAGTCTTCCCTGTCCGACTATCGCCCTCGACGACAATACTATT 1946 ||| ||||| ||||| ||||||||||| | | || ||||| | ||||||||| || Sbjct 14085 TAAAGATCTTGCCCACTCTGTCTTCCCTGTTCTAGACTCACCCTCAATGACAATACTCTT 14144 Query 1947 AGGTC-TATATGGCCGCGCAGCGGCACTCTTCACATTCTCAGACACCCACTCTTCTAACT 2005 |||| | ||||||||||||||||| | | ||||| |||| |||| ||| Sbjct 14145 GGGTCGTTAATGGCCGCGCAGCGGCATCCCTAACATTTTCAGCTGCCCA------GCACT 14198 Query 2006 CCTCAGGGACTCTATCAAACGAAGAAGACAAAAAAGGACTAACATAAACCTCTAATGGAG 2065 | | | | | || |||||| | |||||||||||||||| || | | | Sbjct 14199 C-------AAT-TGTTGAAGGAAGAACAACTAAAAGGACTAACATAAGGTTC--AGGAGG 14248 Query 2066 GTGCA--AAAATCCTATCTAAATTTGATTTTAAATTATGATACTGGAAAATAAAATCTCT 2123 | ||| || || | |||||| |||| || ||||||||| || || | ||| | | Sbjct 14249 GGGCATGAATATTCGATCTAATTTTGGAACTATATTATGATATTGAAATAGAAACTTTGC 14308 Query 2124 TGGGAGTTTCTCCCTAATAACATTTAAAGCAGCTTCAGCA---GACCCAGAATTTAATGC 2180 ||| | ||| || |||||| || ||||| ||||| || || || | |||| || Sbjct 14309 TGGCATTTTTTCTCTAATA--ATAGAAAGC-GCTTCTTCAATTGATGTAGCACTTAACGC 14365 Query 2181 CTCAGCTGCAGCATCGTTAGCTGTCTGTTGACCTCCTCTAGCAGATCTTCCATCGATCTG 2240 || || | |||| || | ||| ||| ||||||||||||||||| ||||||||| || Sbjct 14366 TTCTGCAGATACATCATTTGTTGTATGTGAACCTCCTCTAGCAGATCGTCCATCGATTTG 14425 Query 2241 AAATCGACCCCATTCGACGTAATCTCCGTCCTTCTCGATGTATCTCTTGACATCAGAGCT 2300 ||| ||||| ||| |||||| | ||| ||| |||||||| |||| ||||| || Sbjct 14426 AAAATTGCCCCAGTCGGTGTAATCACAGTCTTTCGCGATGTATTTCTTAACATCTGAAGA 14485 Query 2301 GGATCTAGCTCCCTGGATGTGCGCATGGAATTGGGAGGAGGTGTTGGGATGAGTGACATC 2360 ||| |||| |||| || | ||| || || | || || ||||| ||| ||| Sbjct 14486 TGATTTAGCGGATTGGAAGTTTGGGTGGTATGTGGTGCTAGTATTAGGATGGATGATATC 14545 Query 2361 GAAATGTCTCTCATTTCGGAACTTGGCTTTACCCTTGAATTGTATGAGAGCATGGAGATG 2420 ||| ||||| |||| || | || || || | |||||| || || |||||| ||| Sbjct 14546 GAAGTGTCTAGGGTTTCTAAATTGTGCCTTGCCTTCGAATTGAATAAGGGCATGGCTATG 14605 Query 2421 CAGAGACCCATCTCTGTGTTTCTCTTGTGCAACCCTAATGAACAGTTTCTCAGATGGACA 2480 | |||||| |||||| ||||| || |||| |||||||| | || ||||| Sbjct 14606 AAATTCCCCATCCTGGTGTTTTTCTTGACAGACTCTAA--AACAGTTTATTTGAAGGACA 14663 Query 2481 TGAAATGTTTTTAATGAGCTCGAGCATCTGTTCTTTTGGAATGGGGCATTTTGAATAAGT 2540 |||| | ||| | | |||| | || || ||||| |||| || ||||||| | | || Sbjct 14664 AGAAACCTGTTTCAAGTGCTCTAAGATTTGATCTTTAGGAAGAGGACATTTTGGAAATGT 14723 Query 2541 GAGGAAAATGTTTTTAG 2557 || || |||||||||| Sbjct 14724 AAGAAATATGTTTTTAG 14740 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 8720060514868