Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Solanum_20melongena_20[genbank_20GCA_5F000787875.1_202014-09-30] 33,873 sequences; 833,080,760 total letters Query= NC_009490.1 Length=2609 Score E Sequences producing significant alignments: (Bits) Value seq19028 172 9e-40 >seq19028 Length=31091 Score = 172 bits (190), Expect = 9e-40 Identities = 254/356 (71%), Gaps = 14/356 (4%) Strand=Plus/Plus Query 1508 TTTTCCTCTTTGTCGAGGAAATCTTTATAGCTGCCCCCCTCTCCTGGATTGCACAGCACG 1567 |||||||| | ||||||| |||||||||||| || |||||||||| | | Sbjct 13831 TTTTCCTCCT---CGAGGAACTCTTTATAGCTGGAAGTAGGACCAGGATTGCACAAGAAG 13887 Query 1568 ATTGATGGGATACCACCTTTAATTTGAACCGGCTTTCCATATTTACAGTTGGACTG--CC 1625 |||| || || ||||| || || | || ||| |||| ||||| ||| ||| || Sbjct 13888 ATTGTCGGTATCCCACCCTTTATCTTTACAGGCCTTCCGTATTTTACCTTG--CTGGACC 13945 Query 1626 AATCCTTTTGGGCCCCAATCAATTCTTTCCAGTGCTTTAGCTTTAGGTAGTGCGGTGCGA 1685 ||| |||||||||| || || ||||| |||||||||| | | ||||| ||| Sbjct 13946 AATTGCTTTGGGCCCCCATAAACTCTTTAAAGTGCTTTAGAT------AATGCGGATCGA 13999 Query 1686 CATCATCAATGACGTTATACTCCACATGATTGGAGTAAACCCTAGAATTGAAATCTAAAT 1745 | | |||||||| ||||||| ||| ||| || |||| || ||| |||||||||| Sbjct 14000 CGTTATCAATGATGTTATACCAGGCATTATTTGAATAAATTTTATTATTCAAATCTAAAT 14059 Query 1746 GACCGCTCAAGTAGTTATGTGGGCCTAAAGCACGAGCCCACATTGTCTTGCCCGTTCGTG 1805 |||||| | ||| |||||||| ||||||| | |||||| |||||| || |||| | Sbjct 14060 GACCGCATAGGTAATTATGTGGTCCTAAAGATCTTGCCCACTCTGTCTTCCCTGTTCTAG 14119 Query 1806 ATTCCCCTTCGACGATAATACTAATAGGTC-TCTCTGGCCGCGCAGCGGAACCCCT 1860 | || || || | || |||||| | |||| | |||||||||||||| | |||| Sbjct 14120 ACTCACCCTCAATGACAATACTCTTGGGTCGTTAATGGCCGCGCAGCGGCATCCCT 14175 Score = 118 bits (130), Expect = 2e-23 Identities = 259/381 (68%), Gaps = 24/381 (6%) Strand=Plus/Plus Query 836 GAATCATACGGAGAACGCGTTGTTATTGTATATGGCATGTACTCATGCTTCTAATCCTGT 895 || |||||| || || || ||||| |||||| | |||||||| ||||||||||| Sbjct 13080 GACTCATACTGAAAATGCATTGTT---GTATATTAGTTCAACTCATGCATCTAATCCTGT 13136 Query 896 ATATGCGACATTGAAAATTCGGATCTATTTTTATGATTCGATAACAAATTAATAAAAATT 955 |||| || ||| || || | ||||||||||| || |||||||||||| ||| Sbjct 13137 ATATTGTACTATGAGAACACGCAGTTATTTTTATGAGAGTGTATCAAATTAATAAATATT 13196 Query 956 GAATTTTATTTCATGAGATTCGAGTACATC-------AGTTACATAGCATTTGTCTGTTG 1008 |||||||||||||||| |||| |||||||| | | || || ||| | | Sbjct 13197 GAATTTTATTTCATGATATTCAAGTACATCCACTGTTTGCTCAATTACA-TTGAATAATA 13255 Query 1009 CATAACGAACAGCTCTAATTACATTATTAAGACCAACTACGCCTAACCTATCT--AAGTA 1066 ||| ||||||||||| | ||| |||| || || || ||||| | ||| || | Sbjct 13256 CATTGTCTACAGCTCTAATAATATTGTTAATACTAATAACACCTAATCGGTCTAAAAATT 13315 Query 1067 CAATAAGACCAAATGCCTGAATCTACTTA--AATAAGT-CGTCCCAGAAGCTCGAACTGA 1123 || | || |||| | ||| |||| || | || ||| || | | || || Sbjct 13316 TCATTACACGAAAT--TTAAATACTCTTAAGAAAACGTATGTCGGAGGACGT--AAACGA 13371 Query 1124 TGTCGTCCAAACTTGGAAGTTCAGGAATGCTTTGCGTAGATTCAGCGCCTTCCTGATGTT 1183 |||| | | |||||| ||||| |||||| | |||||||| ||||||| | ||| Sbjct 13372 ----GTCCTGATCTTGAAGTTGAGGAAAGCTTTGTGAAGATTCAGTTCCTTCCTCAGGTT 13427 Query 1184 GTAATTGAACCGGATTTGTAT 1204 || ||||| || |||||||| Sbjct 13428 GTGGTTGAATCGAATTTGTAT 13448 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 8237034418850