Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Solanum_20melongena_20[genbank_20GCA_5F000787875.1_202014-09-30] 33,873 sequences; 833,080,760 total letters Query= NC_009545.1 Length=2761 Score E Sequences producing significant alignments: (Bits) Value seq19028 239 8e-60 >seq19028 Length=31091 Score = 239 bits (264), Expect = 8e-60 Identities = 260/344 (76%), Gaps = 1/344 (0%) Strand=Plus/Plus Query 1672 TTCTTTTCCTCTTCTAAAAACTCTGTATATGAAGAGGTTGGACCTGGATTGCAGAGGAAG 1731 || |||||||| || | |||||| |||| || || ||||| |||||||| | |||| Sbjct 13828 TTTTTTTCCTCCTCGAGGAACTCTTTATAGCTGGAAGTAGGACCAGGATTGCACAAGAAG 13887 Query 1732 ATAGTGGGTATCCCACCTTTAATTTGAACCGGCTTTCCGTACTTTCTGTTGCTTTGCCAG 1791 || || ||||||||||| || || | || ||| ||||||| ||| ||||| ||| Sbjct 13888 ATTGTCGGTATCCCACCCTTTATCTTTACAGGCCTTCCGTATTTTACCTTGCTGGACCAA 13947 Query 1792 TTTGTTTGGGACCCCATGAATTCTTTATAGTGCTTTAGATAGTGCGGGTCGACGTCATCT 1851 || |||||| |||||| || |||||| ||||||||||||| ||||| ||||||| ||| Sbjct 13948 TTGCTTTGGGCCCCCATAAACTCTTTAAAGTGCTTTAGATAATGCGGATCGACGTTATCA 14007 Query 1852 ATTACGTTATACCATGCGTCGTTAGAGAACACATTAGGGTTTAAGTCTAAATGTCCACAT 1911 || | ||||||||| || | || || | | ||| || || |||||||| || ||| Sbjct 14008 ATGATGTTATACCAGGCATTATTTGAATAAATTTTATTATTCAAATCTAAATGACCGCAT 14067 Query 1912 AAGTAATTATGTGGCCCTAATGACCTGGCCCACAACGTTTTCCCGGTTCGACTTTCACCT 1971 | |||||||||||| ||||| || || |||||| || ||||| |||| | ||||| Sbjct 14068 AGGTAATTATGTGGTCCTAAAGATCTTGCCCACTCTGTCTTCCCTGTTCTAGACTCACCC 14127 Query 1972 TCAATGACAATGC-CTTTGGGCCTTAGAGGCCGCGCAGCGGAAT 2014 ||||||||||| | ||| || | ||| ||||||||||||| || Sbjct 14128 TCAATGACAATACTCTTGGGTCGTTAATGGCCGCGCAGCGGCAT 14171 Score = 122 bits (134), Expect = 2e-24 Identities = 296/440 (67%), Gaps = 19/440 (4%) Strand=Plus/Plus Query 985 TCATACGGAGAATGCTTTGTTATTGTATATGTGTTGTACTCAT-CATGAGAACCCTGTGT 1043 |||||| || ||||| ||||| |||||| ||| |||||| ||| || ||||| | Sbjct 13083 TCATACTGAAAATGCATTGTT---GTATATTAGTTCAACTCATGCATCT-AATCCTGTAT 13138 Query 1044 ATGGAACTCTAAAGATCCGCAGTTATTTTTACGACTCGGTATCTAATTAATAAATGTTGT 1103 || | ||| | | | |||||||||||||| || ||||| ||||||||||| ||| Sbjct 13139 ATTGTACTATGAGAACACGCAGTTATTTTTATGAGAGTGTATCAAATTAATAAATATTGA 13198 Query 1104 ATTTTATATCATTTGTCTCTTCGATATCAACTGTACCGTTAA-GACGTTCATACAATACA 1162 ||||||| |||| || | ||| ||||| | || || || | | |||||| Sbjct 13199 ATTTTATTTCATGATATTCAAGTACATCCACTGTTTGCTCAATTACATTGA-ATAATACA 13257 Query 1163 TATTTAACTGCTCTAATTACATTATTAACAGAAATTACACCTAAATTATTCAAATACATC 1222 | | || |||||||| | ||| |||| | ||| |||||||| | ||| | || Sbjct 13258 TTGTCTACAGCTCTAATAATATTGTTAATACTAATAACACCTAATCGGTCTAAAAATTTC 13317 Query 1223 ATTAATTGGGTCTTGAAGACTCTCAAGAAACGCGATGTCTGAGGTTGTAAGCTCGTCCAG 1282 |||| | || || ||||| |||||| ||||| |||| |||| | |||| | Sbjct 13318 ATTACACGAAATTTAAATACTCTTAAGAAAACGTATGTCGGAGGACGTAAACGAGTCCTG 13377 Query 1283 A-CTCGATAGGTTAGAAAACATTTGTGTATCCCCAATGCTTTCCGAAGGTTGTAGTTGAA 1341 | || || || | || ||| |||||| | || | | |||| ||||||| |||||| Sbjct 13378 ATCTTGA-AGTTGAGGAAAGCTTTGTGAAGATTCAGTTCCTTCCTCAGGTTGTGGTTGAA 13436 Query 1342 TTGTATCCTTATTGTTATGATGTCTGTCTCCATGAGGAA-----TGGTCGGTTCTCGTGG 1396 | | || |||| || ||||| || || ||| ||||| | | |||| Sbjct 13437 TCGAATTTGTATTTCGATTATGTCGGT-----TGTCGAATTTGTTGGTCTGAGATTGTGG 13491 Query 1397 TTGATGATCTTGAAATATAG 1416 |||| ||||||||||||||| Sbjct 13492 TTGAGGATCTTGAAATATAG 13511 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 8723259363186