Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Solanum_20melongena_20[genbank_20GCA_5F000787875.1_202014-09-30] 33,873 sequences; 833,080,760 total letters Query= NC_009546.1 Length=2757 Score E Sequences producing significant alignments: (Bits) Value seq19028 336 4e-89 >seq19028 Length=31091 Score = 336 bits (372), Expect = 4e-89 Identities = 955/1448 (66%), Gaps = 117/1448 (8%) Strand=Plus/Plus Query 963 TCATACTGAGAATGCTCTTTTATTGTATATGGCATGTACTCATGCCAGTAACCCAGTGTA 1022 ||||||||| ||||| || |||||||| | |||||||| ||| || || || Sbjct 13083 TCATACTGAAAATGCA---TTGTTGTATATTAGTTCAACTCATGCATCTAATCCTGTATA 13139 Query 1023 TGCTACTTTGAAGATCAGG-ATCTATTTCTATGATTCTGT-TCAGAATTAATAAAGATTG 1080 | |||| ||| || || | | ||||| ||||| ||| ||| |||||||||| |||| Sbjct 13140 TTGTACTATGA-GAACACGCAGTTATTTTTATGAGAGTGTATCA-AATTAATAAATATTG 13197 Query 1081 AATTTTATTATATGAGAATGTGTTACATACTCTGTGTTTTCCAATACATCCCATAATACA 1140 ||||||||| |||| | | ||||| | |||| | || | ||||| |||||||| Sbjct 13198 AATTTTATTTCATGATATTCAAGTACATCCACTGTTTGCTCAATTACATTGAATAATACA 13257 Query 1141 TGAT-TACATGCTCTAATTACATTGTTAATACTAATTACACCCAAATTATCTAAATATTT 1199 | | |||| |||||||| | ||||||||||||||| ||||| || |||||| |||| Sbjct 13258 TTGTCTACA-GCTCTAATAATATTGTTAATACTAATAACACCTAATCGGTCTAAAAATTT 13316 Query 1200 CAT-ACATTGAACTCTAAATACTCTTAAGAAACGCCAAGTCTGAGGTTGTAAGCGAGTCC 1258 ||| ||| ||| | ||||||||||||||||| | ||| |||| |||| ||||||| Sbjct 13317 CATTACAC-GAAATTTAAATACTCTTAAGAAAACGTATGTCGGAGGACGTAAACGAGTCC 13375 Query 1259 AGATTTGGAAGATTAGAAAACATTTGTGTATCCCCAACGCTTTCCTCAGGTTGTGGTTGA 1318 ||| | |||| | || ||| |||||| | || | ||||||||||||||||||| Sbjct 13376 TGATCTTGAAGTTGAGGAAAGCTTTGTGAAGATTCAGTTCCTTCCTCAGGTTGTGGTTGA 13435 Query 1319 ACTGGACCTGGACTGTTATGATGTCGTGGTTCCTCAGAAAT----GGCCTG---TCGTGG 1371 | | | || | | || |||||| ||| || ||| | || ||| | |||| Sbjct 13436 ATCGAATTTGTATTTCGATTATGTCG--GTTG-TC-GAATTTGTTGGTCTGAGATTGTGG 13491 Query 1372 TGCTGGGTCACTTTGAAATAGAGGGGATTGTTGATTGT--CCAGATATAT---------- 1419 | || || |||||||| || | | | || | ||| |||| | Sbjct 13492 TTGAGGATC---TTGAAATATAGAA-ACAGCTAATATTTCCCAAATATGTGGTTGACGTA 13547 Query 1420 ---------ACGCCATTCTCGGCTTGAGCTGCAGTGATGAGTTCCCCTGTGCGTGAATCC 1470 ||||||||| ||||| ||||||||| ||||||||||||| |||| Sbjct 13548 AACGACTAGACGCCATTCATCGCTTGTTGAGCAGTGATGTATTCCCCTGTGCGTATATCC 13607 Query 1471 ATGCGATGCGCAGTTAAT--TCCAAAATAGTATGAGCATCCACAGGGAAGATCAACTCGA 1528 ||| | ||| |||| | |||| | || |||||||| || || || | ||| Sbjct 13608 ATGACCAGAACAGCTAATATTTTTGAATATT--GAACATCCACAAGGCAGGTCTAGTCGT 13665 Query 1529 CGCCTCCGAATTGGCCTCTTCTTG-------GCTATGT---TG----TGCTGGACTT--- 1571 | || | ||| | ||||||||| | ||||| || |||| ||| Sbjct 13666 CTTCTTCTGATTTGTCTCTTCTTGATATCCGGATATGTAAATGAGGTTGCTTTCCTTGTA 13725 Query 1572 ---------TG-----ATTGGTA--------CCTGA--GTACAATGGCTCCGTGAGGGTG 1607 || ||||| | |||| | | ||||| | |||| |||| Sbjct 13726 TAATGTCTATGCATCCATTGGGATAACATTTCCTGCACGAATAATGGTTGTGTGATGGTG 13785 Query 1608 ATGAATTCCGCATTCTTCAATGCCCAGTCCTTTAAAGCTGAATTCTTTTCTTCGTCCAAG 1667 |||||| ||||| | ||| | ||| | ||||| ||| ||||| || || | | Sbjct 13786 TAGAATTCTGCATTATGCAAAGACCAATTTTTTAATTTAATATTTTTTTCCTCCTCGAGG 13845 Query 1668 TACTCTTTATATGATGATGTTGGGCCTGGATTGCAGAGGAAGATAGTTGGGATTCCACCT 1727 |||||||||| || || || || |||||||| | |||||| || || || ||||| Sbjct 13846 AACTCTTTATAGCTGGAAGTAGGACCAGGATTGCACAAGAAGATTGTCGGTATCCCACCC 13905 Query 1728 TTAATTTGAATTGGTTTCCCGTACTTAGTGTTGCTTTGCCAGTCCCTTTGGGCCCCCATG 1787 || || | | || | ||||| || ||||| ||| | |||||||||||||| Sbjct 13906 TTTATCTTTACAGGCCTTCCGTATTTTACCTTGCTGGACCAATTGCTTTGGGCCCCCATA 13965 Query 1788 AATTCTTTAAAGTGCTTTAGGTAGTGGGGGTCTACGTCATCTATGACGTTGTACCATGCA 1847 || ||||||||||||||||| || || || || |||| ||| |||| ||| ||||| ||| Sbjct 13966 AACTCTTTAAAGTGCTTTAGATAATGCGGATCGACGTTATCAATGATGTTATACCAGGCA 14025 Query 1848 TCATTGCTGTACACCTTTGGGCTTAAACCAAGGTGCCCACATAAATAATTATGTGGACCC 1907 | ||| || | || | ||| | | || || |||| ||||||||||| || Sbjct 14026 TTATTTGAATAAATTTTATTATTCAAATCTAAATGACCGCATAGGTAATTATGTGGTCCT 14085 Query 1908 AATGACCTGGCCCACATTGTCTTGCCGGTACGACTATCACCCTCTATTACAATACTTTGA 1967 || || || |||||| |||||| || || | | |||||||| || |||||||| | Sbjct 14086 AAAGATCTTGCCCACTCTGTCTTCCCTGTTCTAGACTCACCCTCAATGACAATACTCTTG 14145 Query 1968 GGTC-TCCACGGCCGCGCAGCGGCATCCCTCACATTCTCAGAGACCCAGACTTCAAGTTC 2026 |||| | | |||||||||||||||||||| ||||| |||| ||||| |||| Sbjct 14146 GGTCGTTAATGGCCGCGCAGCGGCATCCCTAACATTTTCAGCTGCCCAGCACTCAA---- 14201 Query 2027 TTCTGGAACTTGATCGAAAGAAGAAGAAAGAAAAGGACAAACGAAAACCTCCAAAGGA-G 2085 ||| | ||| |||||| || |||||||| ||| || || |||| | Sbjct 14202 ---------TTG-TTGAAGGAAGAACAACTAAAAGGACTAACATAAGGTTC---AGGAGG 14248 Query 2086 GTGCA--AAAATCCTATCTAAATTGGCGTTTAAATTATGAAATTGAAAAATATAATCTTT 2143 | ||| || || | |||||| || | || ||||||| |||| ||||| || |||| Sbjct 14249 GGGCATGAATATTCGATCTAATTTTGGAACTATATTATGATATTG--AAATAGAAACTTT 14306 Query 2144 --TGGGAGTTTCTCCCTTATTATGTTTAATGCTGCTTCCTTAGTAGCTGCATTTAACGCC 2201 ||| | ||| || || || || | ||| |||| | | | ||| ||||||| Sbjct 14307 GCTGGCATTTTTTCTCTAATAATAGAAAGCGCTTCTTCAATTGATGTAGCACTTAACGCT 14366 Query 2202 TCTGCGCAAGCGTCGTTAGCATTCTGGCAGCCTCCCCTAGCACTTCTTCCGTCGATCTGG 2261 ||||| | | || || | | || | ||||| |||||| || ||| ||||| || Sbjct 14367 TCTGCAGATACATCATTTGTTGTATGTGAACCTCCTCTAGCAGATCGTCCATCGATTTGA 14426 Query 2262 AAATCTCCCCATTCGATTGTGTCCCCGTCCTTGTCGATATAGGACTTGACGTCGGAACTG 2321 |||| ||||| ||| | || | ||| || |||| || ||| || || ||| Sbjct 14427 AAATTGCCCCAGTCGGTGTAATCACAGTCTTTCGCGATGTATTTCTTAACATCTGAAGAT 14486 Query 2322 GATTTAGC 2329 |||||||| Sbjct 14487 GATTTAGC 14494 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 8710463969914