Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Solanum_20melongena_20[genbank_20GCA_5F000787875.1_202014-09-30] 33,873 sequences; 833,080,760 total letters Query= NC_009547.1 Length=2753 Score E Sequences producing significant alignments: (Bits) Value seq19028 250 4e-63 >seq19028 Length=31091 Score = 250 bits (276), Expect = 4e-63 Identities = 507/747 (68%), Gaps = 27/747 (4%) Strand=Plus/Plus Query 1585 AATGGCTCCGTGAGGGTGAAGAATTCTGCATTCTTTAATGCCCAGTCTCTGATTGCTGAA 1644 ||||| | |||| |||| ||||||||||||| | || | ||| | | | | | | Sbjct 13768 AATGGTTGTGTGATGGTGTAGAATTCTGCATTATGCAAAGACCAATTTTTTAATTTAATA 13827 Query 1645 TTCTTTTCCTCGTCCAAGTACTCTTTATACGATGAAGTTGGTCCTGGATTGCAAAGGAAG 1704 || |||||||| || | | |||||||||| ||||| || || |||||||| | |||| Sbjct 13828 TTTTTTTCCTCCTCGAGGAACTCTTTATAGCTGGAAGTAGGACCAGGATTGCACAAGAAG 13887 Query 1705 ATTGTCGGGATACCTCCTTTAATTTGAATTGGTTTCCCGTACTTCGTGTTGCTTTGCCAG 1764 |||||||| || || || || || | | || | ||||| || ||||| ||| Sbjct 13888 ATTGTCGGTATCCCACCCTTTATCTTTACAGGCCTTCCGTATTTTACCTTGCTGGACCAA 13947 Query 1765 TCCCTTTGGGCCCCCATGAATTCCTTGAAATGTTTCAGGTAGTGGGGGTCGACGTCATCG 1824 | |||||||||||||| || || || || || || || || || || ||||||| ||| Sbjct 13948 TTGCTTTGGGCCCCCATAAACTCTTTAAAGTGCTTTAGATAATGCGGATCGACGTTATCA 14007 Query 1825 ATTACGTTGTACCACGCATCATTGCTGTAGACCTTTGGGCTTAGGTCCAGATGTCCACAC 1884 || | ||| ||||| |||| ||| || | || | | || | ||| || || Sbjct 14008 ATGATGTTATACCAGGCATTATTTGAATAAATTTTATTATTCAAATCTAAATGACCGCAT 14067 Query 1885 AGATAGTTGTGTGGGCCTAGAGATCGTGCCCACATCGTCTTCCCGGTTCTACTCTCACCC 1944 || || || ||||| |||| ||||| ||||||| |||||||| |||||| ||||||| Sbjct 14068 AGGTAATTATGTGGTCCTAAAGATCTTGCCCACTCTGTCTTCCCTGTTCTAGACTCACCC 14127 Query 1945 TCTATGACTATACTGATCGGTCGCCAA-GGCCGCGCAGCGGCATCCCTCACGTTCTCTGA 2003 || ||||| ||||| | ||||| || |||||||||||||||||||| || || || | Sbjct 14128 TCAATGACAATACTCTTGGGTCGTTAATGGCCGCGCAGCGGCATCCCTAACATTTTCAGC 14187 Query 2004 CACCCAGCATTCAAGTTCTTCTGGAACTTGGTCGAAAGAAGAAGAAAGAAATGGACAAAC 2063 ||||||| |||| | || ||| |||||| || ||| |||| ||| Sbjct 14188 TGCCCAGCACTCAA--------------TTGTTGAAGGAAGAACAACTAAAAGGACTAAC 14233 Query 2064 AAAAACCTCTATAGGA-GGTGCA--AAAATCCTATCTAAATTAGCATTTAAATTATGAAA 2120 | || || |||| || ||| || || | |||||| || | | || ||||||| | Sbjct 14234 ATAAGGTTC---AGGAGGGGGCATGAATATTCGATCTAATTTTGGAACTATATTATGATA 14290 Query 2121 CTGTAAAACATAATCTTTG--GGAGCTAATTCCCTAATTATATTAAGAGCCTC-TGACTT 2177 || ||| | || ||||| || | ||| ||||| ||| ||| || || | | || Sbjct 14291 TTG--AAATAGAAACTTTGCTGGCATTTTTTCTCTAATAATAGAAAGCGCTTCTTCAATT 14348 Query 2178 ACTGCCTGTGTTAAGTGCTGCGGCGTAAGCGTCATTGGCTGATTGTTGGCCCCCTCTTGC 2237 || |||| ||| | || | | ||||| | || ||| || ||||| || Sbjct 14349 GATGTAGCACTTAA-CGCTTCTGCAGATACATCATTTGTTGTATGTGAACCTCCTCTAGC 14407 Query 2238 AGATCGTCCGTCGATCTGAAACTCGCCCCACTCGAGGGTGTCTCCGTCCTTATCGATGTA 2297 ||||||||| ||||| ||||| | |||||| ||| | || | ||| || ||||||| Sbjct 14408 AGATCGTCCATCGATTTGAAAATTGCCCCAGTCGGTGTAATCACAGTCTTTCGCGATGTA 14467 Query 2298 GGACTTGACGTCGGAGCTGGATTTAGC 2324 ||| || || || |||||||| Sbjct 14468 TTTCTTAACATCTGAAGATGATTTAGC 14494 Score = 125 bits (138), Expect = 1e-25 Identities = 296/438 (68%), Gaps = 17/438 (4%) Strand=Plus/Plus Query 959 CATACTGAGAATGCGTTGTTATTGTATATGGCATGTACTCATGCTAGTAATCCAGTGTAT 1018 |||||||| ||||| ||||| |||||| | |||||||| |||||| || ||| Sbjct 13084 CATACTGAAAATGCATTGTT---GTATATTAGTTCAACTCATGCATCTAATCCTGTATAT 13140 Query 1019 GCTACGTTGAAAATCAGGATCTACTTCTATGATTCTGT-TCAGAATTAATAAAGATTGAA 1077 ||| ||| || | | || || ||||| ||| ||| |||||||||| |||||| Sbjct 13141 TGTACTATGAGAACACGCAGTTATTTTTATGAGAGTGTATCA-AATTAATAAATATTGAA 13199 Query 1078 TTTTATT--AT-ATATGAAAAATGAGCCTCAATTGTGCCCTCGAGTTTATCGTACAGTAC 1134 ||||||| || |||| || | | || | ||| ||| | | || | | | ||| Sbjct 13200 TTTTATTTCATGATATTCAA---GTACATCCACTGTTTGCTCAATTACATTGAATAATAC 13256 Query 1135 ATGATTCATTGCCCTAATTACATTGTTAATGCTAATTACTCCTAAATTGTTCAAATACTT 1194 || | | || ||||| | ||||||||| ||||| || ||||| || ||| | || Sbjct 13257 ATTGTCTACAGCTCTAATAATATTGTTAATACTAATAACACCTAATCGGTCTAAAAATTT 13316 Query 1195 CATGCATTGATACTTAAATACTCTTAAGAAACGCCAAGTCTGAGGACGTAAACGAGTCCA 1254 ||| || | |||||||||||||||||| | ||| |||||||||||||||||| Sbjct 13317 CATTACACGAAATTTAAATACTCTTAAGAAAACGTATGTCGGAGGACGTAAACGAGTCCT 13376 Query 1255 GATTTGGCAGATCAGAAAACACTGGTGTATCCCCAACGCTTTCCGCAGGTTGTAGTTGAA 1314 ||| | | || | || ||| | ||| | || | |||| |||||||| |||||| Sbjct 13377 GATCTTGAAGTTGAGGAAAGCTTTGTGAAGATTCAGTTCCTTCCTCAGGTTGTGGTTGAA 13436 Query 1315 CTGGACTTGGACTGTTATTACGTCGTGTTTCGTCGAAAACG---GCCTCTCGTCGTGCTG 1371 | | ||| | | |||| |||| ||| |||||| | | || | ||| | Sbjct 13437 TCGAATTTGTATTTCGATTATGTCG-GTT--GTCGAATTTGTTGGTCTGAGATTGTGGTT 13493 Query 1372 GGTGATCTTGAAATATAG 1389 | ||||||||||||||| Sbjct 13494 GAGGATCTTGAAATATAG 13511 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 8697668576642