Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Solanum_20melongena_20[genbank_20GCA_5F000787875.1_202014-09-30] 33,873 sequences; 833,080,760 total letters Query= NC_009549.1 Length=2751 Score E Sequences producing significant alignments: (Bits) Value seq19028 300 3e-78 >seq19028 Length=31091 Score = 300 bits (332), Expect = 3e-78 Identities = 568/822 (69%), Gaps = 29/822 (4%) Strand=Plus/Plus Query 1602 TGCATTCTTTACAGCCCAATTTTTAAGTGCGCTGTTCTTTTCTTCATCCAAGAACTCTTT 1661 |||||| | | || ||||||||| | | | || ||||| || || | ||||||||| Sbjct 13794 TGCATTATGCAAAGACCAATTTTTTAATTTAATATTTTTTTCCTCCTCGAGGAACTCTTT 13853 Query 1662 ATAGCTGGAATGTGGTCCTGGATTGCAGAGGAAGATAGTGGGAATACCCCCTTTAATTTG 1721 |||||||||| || || |||||||| | |||||| || || || || || || || | Sbjct 13854 ATAGCTGGAAGTAGGACCAGGATTGCACAAGAAGATTGTCGGTATCCCACCCTTTATCTT 13913 Query 1722 AACTGGCTTCCCGTATTTGGTGTTGCTTTGCCAGTCTCTTTGGGCCCCCATGAACTCTTT 1781 || ||| | |||||||| ||||| ||| | |||||||||||||| |||||||| Sbjct 13914 TACAGGCCTTCCGTATTTTACCTTGCTGGACCAATTGCTTTGGGCCCCCATAAACTCTTT 13973 Query 1782 AAAGTGCTTTAGATAGTGGGGATCGACGTCATCAATGACGTTATACCAGGCACTGTTGTT 1841 ||||||||||||||| || |||||||||| |||||||| ||||||||||||| | || Sbjct 13974 AAAGTGCTTTAGATAATGCGGATCGACGTTATCAATGATGTTATACCAGGCATTATTTGA 14033 Query 1842 GTACACTTTTGGACTTAAATCTAAATGTCCGCATAAGTAGTTATGTGGTCCCAAAGACCT 1901 || | ||| | | ||||||||||| ||||||| ||| ||||||||||| ||||| || Sbjct 14034 ATAAATTTTATTATTCAAATCTAAATGACCGCATAGGTAATTATGTGGTCCTAAAGATCT 14093 Query 1902 GGCCCATATCGTCTTCCCTGTCCTACTATCGCCCTCTACCACAATACTTATCGGTC-TTA 1960 ||||| ||||||||||| ||| || ||||| | |||||||| | |||| ||| Sbjct 14094 TGCCCACTCTGTCTTCCCTGTTCTAGACTCACCCTCAATGACAATACTCTTGGGTCGTTA 14153 Query 1961 ATGGCCGCGCAGCGGCATTGACAACGTTTGCGGAAACCCATTCATTAAGTTCCTCTGGAA 2020 |||||||||||||||||| ||| ||| | | |||| || ||| || Sbjct 14154 ATGGCCGCGCAGCGGCATCCCTAACATTTTCAGCTGCCCA-GCA--------CTC---AA 14201 Query 2021 CTTGGTCGAATGAAGAAGAACAAAAAGGAGAAATGTAAATTTCTATTGGATGAGTAAAAA 2080 | || ||| |||||| ||| ||||||| || ||| ||| || | | || | Sbjct 14202 --TTGTTGAAGGAAGAACAACTAAAAGGACTAACATAAGGTTCAGGAGGGGGCATGAATA 14259 Query 2081 TCCTATCTAAATTATTATTTAAATTATGGAACTGTAAAACAAAATCTTTGGGAGC-TTTC 2139 | | |||||| || | || |||||| | || ||| | || ||||| || ||| Sbjct 14260 TTCGATCTAATTTTGGAACTATATTATGATATTG--AAATAGAAACTTTGCTGGCATTTT 14317 Query 2140 TCCCTTAATATATTGAGGGCCGATGCTT---TGGCCCCTGAATTGAGTGCCTCGGCATAT 2196 | | ||||| || || | || | ||| | | | | | | || || ||| || Sbjct 14318 TTCTCTAATA-ATAGAAAG-CGCTTCTTCAATTGATGTAGCACTTAACGCTTCTGCAGAT 14375 Query 2197 GCGTCGTTGGCAGATTGGCAACCTCCTCTAGCCGATCGTCCATCGATCTGGAAAATTCCA 2256 | || || | | || ||||||||||||| |||||||||||||| || ||| | || Sbjct 14376 ACATCATTTGTTGTATGTGAACCTCCTCTAGCAGATCGTCCATCGATTTGAAAATTGCCC 14435 Query 2257 TGATCAAGCACGTCTCCGTCTTTTTCCATGTATGATTTAACATCTGATGAGCTTTTAGCT 2316 || || | |||||| | |||||| ||||||||||| || |||||| Sbjct 14436 CAGTCGGTGTAATCACAGTCTTTCGCGATGTATTTCTTAACATCTGAAGATGATTTAGCG 14495 Query 2317 CCCTGAATGTTTGGATGGAAATGTGCTGACCTGGT-TGGGGAT--ATGAGATCGAAGAAT 2373 || | |||||| ||| ||||| || || || | |||| |||| ||||||| | Sbjct 14496 GATTGGAAGTTTGGGTGG-TATGTGGTG--CTAGTATTAGGATGGATGATATCGAAGTGT 14552 Query 2374 CTTTGATTTTTACACTGGAATTTCCCTTCGAATTGGATGAGG 2415 || | ||| || | || || ||||||||||| || ||| Sbjct 14553 CTAGGGTTTCTAAATTGTGCCTTGCCTTCGAATTGAATAAGG 14594 Score = 179 bits (198), Expect = 6e-42 Identities = 258/358 (72%), Gaps = 7/358 (2%) Strand=Plus/Plus Query 953 CACACAGAGAATGCTTTGTTATTGTATATGGCATGTACTCATGCTAGTAATCCAGTGTAT 1012 || || || ||||| ||||| |||||| | |||||||| |||||| || ||| Sbjct 13084 CATACTGAAAATGCATTGTT---GTATATTAGTTCAACTCATGCATCTAATCCTGTATAT 13140 Query 1013 GCTACTTTGAAAATCAGGATCTATTTCTATGATTCTGT-TCAGAATTAATAAATGTTGAA 1071 |||| ||| || | | ||||| ||||| ||| ||| ||||||||||| ||||| Sbjct 13141 TGTACTATGAGAACACGCAGTTATTTTTATGAGAGTGTATCA-AATTAATAAATATTGAA 13199 Query 1072 TTTTATTATATTTGAGAGATGTGCATCAATTGTGCCTTCCAATACATTGTACAATACATG 1131 ||||||| || | | || |||| | ||| || | ||||||| | ||||||| Sbjct 13200 TTTTATTTCATGATATTCAAGTACATCCACTGTTTGCTCAATTACATTGAATAATACATT 13259 Query 1132 ATTAATTGCTCTAATTACATTGTTGATGCTAATTACTCCTAACATGTCTAAATATTTCA- 1190 | | |||||||| | |||||| || ||||| || ||||| ||||||| |||||| Sbjct 13260 GTCTACAGCTCTAATAATATTGTTAATACTAATAACACCTAATCGGTCTAAAAATTTCAT 13319 Query 1191 TACATTGATATTTAAATACTCTTAAGAAACGCGAGGTCTGAGGACGTAAACGAGTCCAGA 1250 |||| || |||||||||||||||||||| | ||| |||||||||||||||||| || Sbjct 13320 TACA-CGAAATTTAAATACTCTTAAGAAAACGTATGTCGGAGGACGTAAACGAGTCCTGA 13378 Query 1251 TTTGGCAGATTAGAAAACATTTGTGTATCCCCAACGCTTTCCTCAGGTTGTAGTTGAA 1308 | | | || | || ||| |||||| | || | ||||||||||||| |||||| Sbjct 13379 TCTTGAAGTTGAGGAAAGCTTTGTGAAGATTCAGTTCCTTCCTCAGGTTGTGGTTGAA 13436 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 8691270880006