Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Solanum_20melongena_20[genbank_20GCA_5F000787875.1_202014-09-30] 33,873 sequences; 833,080,760 total letters Query= NC_009550.1 Length=2740 Score E Sequences producing significant alignments: (Bits) Value seq19028 205 2e-49 >seq19028 Length=31091 Score = 205 bits (226), Expect = 2e-49 Identities = 267/368 (73%), Gaps = 1/368 (0%) Strand=Plus/Plus Query 1638 TCTTCGTCTAGGTACTCTTTATATGATGACGTTGGGCCTGGATTGCAGAGGAAGATTGTT 1697 || || || ||| |||||||||| || || || || |||||||| | ||||||||| Sbjct 13834 TCCTCCTCGAGGAACTCTTTATAGCTGGAAGTAGGACCAGGATTGCACAAGAAGATTGTC 13893 Query 1698 GGGATGCCACCTTTAATTTGAATGGGCTTCCCGTACTTTGTGTTGCTTTGCCAGTCCCTT 1757 || || ||||| || || | | ||| | ||||| ||| ||||| ||| | ||| Sbjct 13894 GGTATCCCACCCTTTATCTTTACAGGCCTTCCGTATTTTACCTTGCTGGACCAATTGCTT 13953 Query 1758 TGGGCCCCCATGAATTCTTTAAAGTGCTTTAGATAGTGGGGGTCTACGTCATCAACCACG 1817 ||||||||||| || |||||||||||||||||||| || || || |||| ||||| | | Sbjct 13954 TGGGCCCCCATAAACTCTTTAAAGTGCTTTAGATAATGCGGATCGACGTTATCAATGATG 14013 Query 1818 TTGTACCATGCCTCGTTGCTGTACACCTTGGGGCTCAAGTCAAGGTGCCCACACAAATAA 1877 || ||||| || | || || | || |||| || | || || || | ||| Sbjct 14014 TTATACCAGGCATTATTTGAATAAATTTTATTATTCAAATCTAAATGACCGCATAGGTAA 14073 Query 1878 TTATGTGGACCCAAAGACCTAGCCCACATGGTCTTGCCGGTCCTACTATCACCCTCAATA 1937 |||||||| || ||||| || |||||| ||||| || || ||| ||||||||||| Sbjct 14074 TTATGTGGTCCTAAAGATCTTGCCCACTCTGTCTTCCCTGTTCTAGACTCACCCTCAATG 14133 Query 1938 ACAATACTAACCGGTC-TCCAAGGCCGCGCAGCGGCACCCATGACATTTTCGGACACCCA 1996 |||||||| |||| | | ||||||||||||||| || | |||||||| | |||| Sbjct 14134 ACAATACTCTTGGGTCGTTAATGGCCGCGCAGCGGCATCCCTAACATTTTCAGCTGCCCA 14193 Query 1997 GCACTCAA 2004 |||||||| Sbjct 14194 GCACTCAA 14201 Score = 122 bits (134), Expect = 2e-24 Identities = 251/370 (68%), Gaps = 5/370 (1%) Strand=Plus/Plus Query 942 GAATCACACTGAGAATGCGTTAATTTTGTATATGGCATGTACTCATGCTTCTAATCCCGT 1001 || ||| ||||| ||||| || |||||||| | |||||||| |||||||| || Sbjct 13080 GACTCATACTGAAAATGCATTG---TTGTATATTAGTTCAACTCATGCATCTAATCCTGT 13136 Query 1002 GTATGCTACTCTGAAAATCAGAATCTATTTTTATGATTCTGTTAACAATTAATAAATATT 1061 ||| |||| ||| || | | ||||||||||| ||| |||||||||||||| Sbjct 13137 ATATTGTACTATGAGAACACGCAGTTATTTTTATGAGAGTGTATCAAATTAATAAATATT 13196 Query 1062 GAATTTTATTATATGTCTCTCGGAAACTGAGAGAGTGTTGTTGAA-TACATCGTACAATA 1120 |||||||||| ||| || || | || ||| | || ||||| | | |||| Sbjct 13197 GAATTTTATTTCATGATATTCAAGTACATCCACTGT-TTGCTCAATTACATTGAATAATA 13255 Query 1121 CATAATCTACTGCTCTTATTACATCATTAAGTGAAATTACACCTAAATTATTTAAATAAC 1180 ||| ||||| ||||| || | || |||| ||| |||||||| | |||| | Sbjct 13256 CATTGTCTACAGCTCTAATAATATTGTTAATACTAATAACACCTAATCGGTCTAAAAATT 13315 Query 1181 CTAATACATGTCTACTAAATATTCGCAAGAAACGCGAGGTCGGAGCTCGTAAGGGAGTCA 1240 | |||| | |||||| || |||||| | ||||||| ||||| ||||| Sbjct 13316 TCATTACACGAAATTTAAATACTCTTAAGAAAACGTATGTCGGAGGACGTAAACGAGTCC 13375 Query 1241 AAACCCGAAAGTTGAGGAAGCATTGGTGTATCTCCAATGCTTTCCTCAGGTTGTGGTTGA 1300 | | ||||||||||| || ||| | | || | | ||||||||||||||||||| Sbjct 13376 TGATCTTGAAGTTGAGGAAAGCTTTGTGAAGATTCAGTTCCTTCCTCAGGTTGTGGTTGA 13435 Query 1301 ACCGTATTTG 1310 | || ||||| Sbjct 13436 ATCGAATTTG 13445 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 8656083548508