Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Solanum_20melongena_20[genbank_20GCA_5F000787875.1_202014-09-30] 33,873 sequences; 833,080,760 total letters Query= NC_009553.1 Length=2752 Score E Sequences producing significant alignments: (Bits) Value seq19028 284 2e-73 >seq19028 Length=31091 Score = 284 bits (314), Expect = 2e-73 Identities = 576/844 (68%), Gaps = 31/844 (4%) Strand=Plus/Plus Query 1598 TGAGGGTGATGAATTCCGCATTCTTTAATGCCCAATATTTTAATGCTGAGTTTTTCTCTT 1657 ||| |||| |||||| ||||| | || | ||||| ||||||| ||||| || | Sbjct 13778 TGATGGTGTAGAATTCTGCATTATGCAAAGACCAATTTTTTAATTTAATATTTTTTTCCT 13837 Query 1658 CATCCAAGAATTCTTTATAGCTAGAGTTGGGTCCTGGATTGCAGAGGAAGATAGTGGGAA 1717 | || | ||| ||||||||||| || | || || |||||||| | |||||| || || | Sbjct 13838 CCTCGAGGAACTCTTTATAGCTGGAAGTAGGACCAGGATTGCACAAGAAGATTGTCGGTA 13897 Query 1718 TTCCGCCTTTAATTTGAACTGGCTTTCCGTATTTAGTGTTGCTTTGCCAGTCCCTTTGGG 1777 | || || || || | || ||| |||||||||| ||||| ||| | ||||||| Sbjct 13898 TCCCACCCTTTATCTTTACAGGCCTTCCGTATTTTACCTTGCTGGACCAATTGCTTTGGG 13957 Query 1778 CCCCCATGAATTCTTTAAAGTGCTTTAGATAGTGGGGGTCGACGTCATCGATGACGTTAT 1837 ||||||| || |||||||||||||||||||| || || ||||||| ||| |||| ||||| Sbjct 13958 CCCCCATAAACTCTTTAAAGTGCTTTAGATAATGCGGATCGACGTTATCAATGATGTTAT 14017 Query 1838 ACCAGGCATCATTATTGTATACCTTT--GGACTGAGATCAAGGTGACCACAGAGATAATT 1895 ||||||||| || ||| ||| ||| | | | ||| | ||||| || || ||||| Sbjct 14018 ACCAGGCATTAT--TTGAATAAATTTTATTATTCAAATCTAAATGACCGCATAGGTAATT 14075 Query 1896 ATGTGGGCCTAATGATCTTGCCCACATCGTCTTTCCTGTTCTACTATCACCTTCAATTAC 1955 |||||| ||||| |||||||||||| ||||| ||||||||| ||||| ||||| || Sbjct 14076 ATGTGGTCCTAAAGATCTTGCCCACTCTGTCTTCCCTGTTCTAGACTCACCCTCAATGAC 14135 Query 1956 TATACTCATGGGTC-TCAATGGCCGCGCAGCGGCACTGACGACATTCTCGGCAGCCCATT 2014 |||||| |||||| | |||||||||||||||||| ||||| || || ||||| Sbjct 14136 AATACTCTTGGGTCGTTAATGGCCGCGCAGCGGCATCCCTAACATTTTCAGCTGCCCAGC 14195 Query 2015 CCTCAAGTTCCTCTGGAACTTGATCGAAAGAAGAAGATAAAAAAGGAGAAATATATTCCT 2074 ||||| ||| | ||| |||||| | ||||||| || ||| | Sbjct 14196 ACTCAA-------------TTG-TTGAAGGAAGAACAACTAAAAGGACTAACATAAGGTT 14241 Query 2075 CTATTGGAGGAGTAAAAATCCTATCTAAATTAGAATTTAAATTATGAAACTGTAAAACAA 2134 | || || | || || | |||||| || | | || ||||||| | || ||| | Sbjct 14242 CAGGAGGGGGCATGAATATTCGATCTAATTTTGGAACTATATTATGATATTG--AAATAG 14299 Query 2135 AATCTTTAGGAGC-CTTCTCCTTTAATATATTGAGGGCCGCTGCTT---TGGACCCTGAA 2190 || |||| || || | || ||||| || || | |||| ||| | || | | Sbjct 14300 AAACTTTGCTGGCATTTTTTCTCTAATA-ATAGAAAG-CGCTTCTTCAATTGATGTAGCA 14357 Query 2191 TTGATTGCCTCGGCATATGCGTCGTTGGCAGATTGGCAACCTCCTCTAGCTGATCTTCCA 2250 | | || || ||| || | || || | | || ||||||||||||| |||| |||| Sbjct 14358 CTTAACGCTTCTGCAGATACATCATTTGTTGTATGTGAACCTCCTCTAGCAGATCGTCCA 14417 Query 2251 TCGATCTGGAAAACTCCATGATCAAGCACGTCTCCGTCTTTTTCCATGTATGCTTTAACA 2310 ||||| || ||| || || || | |||||| | |||||| |||||| Sbjct 14418 TCGATTTGAAAATTGCCCCAGTCGGTGTAATCACAGTCTTTCGCGATGTATTTCTTAACA 14477 Query 2311 TCTGTTGAGCTTTTAGCTCCCTGAATGTTCGGATGGAAATGTGCTGACCTGCTTGGGGAT 2370 |||| || |||||| || | ||| || ||| ||||| || | | | |||| Sbjct 14478 TCTGAAGATGATTTAGCGGATTGGAAGTTTGGGTGG-TATGTGGTG-CTAGTATTAGGAT 14535 Query 2371 G--TGAGATCGAAGAATCTGTTGTTTTGGCATTTGAATTTGCCTTCGAACTGGATGAGGA 2428 | ||| ||||||| ||| |||| ||| ||||||||||| || || ||| Sbjct 14536 GGATGATATCGAAGTGTCTAGGGTTTCTAAATTGTGCCTTGCCTTCGAATTGAATAAGGG 14595 Query 2429 CATG 2432 |||| Sbjct 14596 CATG 14599 Score = 205 bits (226), Expect = 2e-49 Identities = 278/382 (73%), Gaps = 7/382 (2%) Strand=Plus/Plus Query 962 CATACTGAAAATGCTTTGTTGTTGTATATGGCATGTACTCATGCCTCTAATCCTGTGTAT 1021 |||||||||||||| |||| ||||||| | |||||||| ||||||||||| ||| Sbjct 13084 CATACTGAAAATGCATTGT---TGTATATTAGTTCAACTCATGCATCTAATCCTGTATAT 13140 Query 1022 GCTACTTTGAAAGTCAGAAGTTATTTCTATGACTCAGTGACGAATTAATAAAGATTGAAT 1081 |||| ||| | | |||||||| ||||| || | |||||||||| ||||||| Sbjct 13141 TGTACTATGAGAACACGCAGTTATTTTTATGAGAGTGTATCAAATTAATAAATATTGAAT 13200 Query 1082 TTTATTATATTAGACTGTCTTACATATTCTGTCTTTTCCAATACATCCCATAATACATGA 1141 |||||| || | | | ||||| |||| | || | ||||| ||||||||| Sbjct 13201 TTTATTTCATGATATTCAAGTACATCCACTGTTTGCTCAATTACATTGAATAATACATTG 13260 Query 1142 TC-ACATGCTCTAATTACATTGTTAATACTAATTACACCCAAATTATCTAAATATTTCA- 1199 || ||| |||||||| | ||||||||||||||| ||||| || |||||| |||||| Sbjct 13261 TCTACA-GCTCTAATAATATTGTTAATACTAATAACACCTAATCGGTCTAAAAATTTCAT 13319 Query 1200 TACATTGAACCCTAAATACTCTTAAGAAACGCCAAGTCTGAGGTTGTAAGCGAGTCCAGA 1259 |||| ||| ||||||||||||||||| | ||| |||| |||| ||||||| || Sbjct 13320 TACA-CGAAATTTAAATACTCTTAAGAAAACGTATGTCGGAGGACGTAAACGAGTCCTGA 13378 Query 1260 TCTGGAAGATTAGAAAACACTGGTGTATTCCCAACGCTTTCCTCAGGTTGTGGTTGAACT 1319 ||| |||| | || ||| | ||| | || | |||||||||||||||||||| Sbjct 13379 TCTTGAAGTTGAGGAAAGCTTTGTGAAGATTCAGTTCCTTCCTCAGGTTGTGGTTGAATC 13438 Query 1320 GTATTTGGATCTGTATGATGTC 1341 | ||||| || | || ||||| Sbjct 13439 GAATTTGTATTTCGATTATGTC 13460 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 8694469728324