Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Solanum_20melongena_20[genbank_20GCA_5F000787875.1_202014-09-30] 33,873 sequences; 833,080,760 total letters Query= NC_009607.1 Length=2593 Score E Sequences producing significant alignments: (Bits) Value seq19028 167 4e-38 >seq19028 Length=31091 Score = 167 bits (184), Expect = 4e-38 Identities = 273/390 (70%), Gaps = 9/390 (2%) Strand=Plus/Plus Query 1447 GAATTTCGCATTGTGCTTTGTCCAATTATTTAGACTTGCATTTTCTTCTTTGTCGAGGAA 1506 ||||| ||||| ||| | |||||| |||| | ||||| ||| | |||||||| Sbjct 13788 GAATTCTGCATTATGCAAAGACCAATTTTTTAATTTAATATTTTTTTCCTCCTCGAGGAA 13847 Query 1507 ACATTTATAGCTGGCCCCCTCGCCAGGATTGCAAAGCACGATGCATGGGATACCACCTTT 1566 ||||||||||| ||||||||||| | | ||| || || ||||| || Sbjct 13848 CTCTTTATAGCTGGAAGTAGGACCAGGATTGCACAAGAAGATTGTCGGTATCCCACCCTT 13907 Query 1567 AATTTGAACTGGCTTTCCGTATTTGCAGTTTGATTG-CCAATCCTTTTGGGCCCCAAGCA 1625 || | || ||| |||||||||| | ||| | | ||||| |||||||||| | | Sbjct 13908 TATCTTTACAGGCCTTCCGTATTTT-ACCTTGCTGGACCAATTGCTTTGGGCCCCCATAA 13966 Query 1626 ATTCTTTCCAGTGCTTTAACTTTAGATAGTGCGGTGCGATGTCATCAATGACGTTATATT 1685 | ||||| ||||||||| |||| ||||| ||| || |||||||| |||||| Sbjct 13967 ACTCTTTAAAGTGCTTTA------GATAATGCGGATCGACGTTATCAATGATGTTATACC 14020 Query 1686 CAACATGATTTGAATAAACCCTAGGATTGAAATCTAGGTGTCCACTCAAATAATTATGGG 1745 ||| ||||||||||| || ||| ||||||| || || | | |||||||| | Sbjct 14021 AGGCATTATTTGAATAAATTTTATTATTCAAATCTAAATGACCGCATAGGTAATTATGTG 14080 Query 1746 CCCCTAATGCACGTGCCCACATCGTCTTTCCCGTTCGAGAATCACCTTCAATGATGATAC 1805 ||||| | | ||||||| ||||| || |||| ||| ||||| ||||||| |||| Sbjct 14081 GTCCTAAAGATCTTGCCCACTCTGTCTTCCCTGTTCTAGACTCACCCTCAATGACAATAC 14140 Query 1806 TAATAGGTCGTT-CCGGCCGCGCAGCGGCA 1834 | | ||||||| ||||||||||||||| Sbjct 14141 TCTTGGGTCGTTAATGGCCGCGCAGCGGCA 14170 Score = 102 bits (112), Expect = 1e-18 Identities = 255/381 (67%), Gaps = 30/381 (8%) Strand=Plus/Plus Query 815 GAATCATACTGAGAACGCCTTGCTATTGTATATGGCATGTACTCATGCCTCTAACCCCGT 874 || ||||||||| || || ||| |||||||| | |||||||| ||||| || || Sbjct 13080 GACTCATACTGAAAATGCATTG---TTGTATATTAGTTCAACTCATGCATCTAATCCTGT 13136 Query 875 GTATGCTACATTGAAAATTCGGATCTATTTTTATGATTCGATTACTAATTAATAAAATTT 934 ||| ||| ||| || || | ||||||||||| | | |||||||||| || Sbjct 13137 ATATTGTACTATGAGAACACGCAGTTATTTTTATGAGAGTGTATCAAATTAATAAATATT 13196 Query 935 AAATTTTATTGAATGATTTTCGAGTACAGC----ATTT--ACATATGATTTGTCTGTTGC 988 ||||||||| ||||| ||| |||||| | ||| || | ||| | | | Sbjct 13197 GAATTTTATTTCATGATATTCAAGTACATCCACTGTTTGCTCAATTACATTGAATAATAC 13256 Query 989 AAAACGAACAGCTCTGATTACATTATTAATGGAAATAACGCCTAATCGATCT--AGATAC 1046 | |||||||| || | ||| ||||| |||||| |||||||| ||| | || Sbjct 13257 ATTGTCTACAGCTCTAATAATATTGTTAATACTAATAACACCTAATCGGTCTAAAAATTT 13316 Query 1047 AATAAGACTAAATATTTAAATCTAGTTAA------ATATGTCGTCCCAGAAGCTGTCAGT 1100 || | || || |||||||| |||| ||||||| || | || | Sbjct 13317 CATTACACGAA--ATTTAAATACTCTTAAGAAAACGTATGTCG-----GAGGACGTAAAC 13369 Query 1101 GAAGTCGTCCATATCTGGAAGTTGAGG-AAGCTCTTGTGGAGATGCAATGCTCTCCTCAG 1159 || |||| |||| |||||||||| ||||| ||||| |||| || | | ||||||| Sbjct 13370 GA----GTCCTGATCTTGAAGTTGAGGAAAGCT-TTGTGAAGATTCAGTTCCTTCCTCAG 13424 Query 1160 GTTGTGGTTGAACCGTATTTG 1180 |||||||||||| || ||||| Sbjct 13425 GTTGTGGTTGAATCGAATTTG 13445 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 8185852845762