Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Solanum_20melongena_20[genbank_20GCA_5F000787875.1_202014-09-30] 33,873 sequences; 833,080,760 total letters Query= NC_009644.1 Length=2677 Score E Sequences producing significant alignments: (Bits) Value seq19028 210 4e-51 >seq19028 Length=31091 Score = 210 bits (232), Expect = 4e-51 Identities = 264/359 (74%), Gaps = 5/359 (1%) Strand=Plus/Plus Query 1532 TTCTTTTCCTCTTCGAAGAACTCCTTATATGATGAAGTAGGCCCAGGATTGCAGAGGAAG 1591 || |||||||| |||| |||||| ||||| |||||||| ||||||||||| | |||| Sbjct 13828 TTTTTTTCCTCCTCGAGGAACTCTTTATAGCTGGAAGTAGGACCAGGATTGCACAAGAAG 13887 Query 1592 ATTGTTGGAATCCCTCCATTTATTTGAATTGGTTTGCCGTACTTGCAGTTGGACTG--CC 1649 ||||| || ||||| || ||||| | | || | ||||| || ||| ||| || Sbjct 13888 ATTGTCGGTATCCCACCCTTTATCTTTACAGGCCTTCCGTATTTTACCTTG--CTGGACC 13945 Query 1650 AGTCTCTCTGGGCCCCCATAAATTCCTTCATATGCTTTAGATAGTGCGGGTCGACATCAT 1709 | | || |||||||||||||| || || | ||||||||||| ||||| ||||| | || Sbjct 13946 AATTGCTTTGGGCCCCCATAAACTCTTTAAAGTGCTTTAGATAATGCGGATCGACGTTAT 14005 Query 1710 CAATGACGTTGTACCAGGCCTCATTTGAATACACTTTTGGGCTTAGATCAAGATGTCCAC 1769 |||||| ||| |||||||| | ||||||||| | ||| | | ||| | ||| || | Sbjct 14006 CAATGATGTTATACCAGGCATTATTTGAATAAATTTTATTATTCAAATCTAAATGACCGC 14065 Query 1770 AAAGATAATTGTGACGACCCAAACTTCTGGCCCATAATGTTTTCCCTGTCCTAGATGGAC 1829 | || ||||| || | || ||| ||| ||||| ||| |||||||| ||||| || Sbjct 14066 ATAGGTAATTATGTGGTCCTAAAGATCTTGCCCACTCTGTCTTCCCTGTTCTAGACTCAC 14125 Query 1830 CTTCAATGATAATAGATATCGG-CCTAAAGGGCCGCGCAGCGGCATCCATTATATTATC 1887 | ||||||| |||| | || | | || |||||||||||||||||| | | ||| || Sbjct 14126 CCTCAATGACAATACTCTTGGGTCGTTAATGGCCGCGCAGCGGCATCCCTAACATTTTC 14184 Score = 98.7 bits (108), Expect = 2e-17 Identities = 105/138 (76%), Gaps = 3/138 (2%) Strand=Plus/Plus Query 860 TCACACTGAGAATGCATTATTATTGTATATGGCATGTACTCATGCCTCTAATCCTGTGTA 919 ||| ||||| |||||||| || |||||| | |||||||| ||||||||||| || Sbjct 13083 TCATACTGAAAATGCATTGTT---GTATATTAGTTCAACTCATGCATCTAATCCTGTATA 13139 Query 920 TGCTACTTTAAAGATACGGATCTATTTCTATGATTCGATATCAAATTAATAAATATTGAA 979 | |||| | | | ||| | ||||| ||||| |||||||||||||||||||||| Sbjct 13140 TTGTACTATGAGAACACGCAGTTATTTTTATGAGAGTGTATCAAATTAATAAATATTGAA 13199 Query 980 TTTTATTATATGATTTTC 997 ||||||| ||||| ||| Sbjct 13200 TTTTATTTCATGATATTC 13217 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 8454556104474