Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Solanum_20melongena_20[genbank_20GCA_5F000787875.1_202014-09-30] 33,873 sequences; 833,080,760 total letters Query= NC_009645.1 Length=2731 Score E Sequences producing significant alignments: (Bits) Value seq19028 208 1e-50 >seq19028 Length=31091 Score = 208 bits (230), Expect = 1e-50 Identities = 310/435 (71%), Gaps = 6/435 (1%) Strand=Plus/Plus Query 1595 GGTTCTGTGAGCGTGTAGAAGATAGCATTTTTTAAAGCCCACTCTTTGAGACTCGCATTA 1654 |||| ||||| |||||||| ||||| | |||| ||| | ||| | | ||| Sbjct 13771 GGTTGTGTGATGGTGTAGAATTCTGCATTATGCAAAGACCAATTTTTTAATTTAATATTT 13830 Query 1655 TTCTCTTCGTCGAGGAACATTTTATAAGAGGATCTGGGTCCCGCATTACAGAGAAAGATG 1714 || || || ||||||||| |||||| ||| | || || | ||| || | ||||| Sbjct 13831 TTTTCCTCCTCGAGGAACTCTTTATAGCTGGAAGTAGGACCAGGATTGCACAAGAAGATT 13890 Query 1715 GTGGGGATGCCACCTTTAATTTGAGTGGGCTTTCCGTATTTCACGTTGCTTTGCCAGTCC 1774 || || || ||||| || || | ||| |||||||||| || ||||| ||| | Sbjct 13891 GTCGGTATCCCACCCTTTATCTTTACAGGCCTTCCGTATTTTACCTTGCTGGACCAATTG 13950 Query 1775 TTTTGCGCGCCCATGAATTCTTTGAAATGTTTCAGATAATGCGGATCGACGTCATCGATT 1834 |||| || ||||| || ||||| || || || ||||||||||||||||||| ||| || Sbjct 13951 CTTTGGGCCCCCATAAACTCTTTAAAGTGCTTTAGATAATGCGGATCGACGTTATCAATG 14010 Query 1835 ACGTTGTACCACGCATCATTTGAATAAACTTTGGCGCTTAGATCCAAATGGCCGCACAAA 1894 | ||| ||||| |||| ||||||||||| ||| | | ||| ||||| ||||| | Sbjct 14011 ATGTTATACCAGGCATTATTTGAATAAATTTTATTATTCAAATCTAAATGACCGCATAGG 14070 Query 1895 TAATTGTGCCGACCGAGCGACCTCGCCCACATGGTTTTACCCGTACGTGACTCACCCTCA 1954 ||||| || | || | || || |||||| || || || || | |||||||||||| Sbjct 14071 TAATTATGTGGTCCTAAAGATCTTGCCCACTCTGTCTTCCCTGTTCTAGACTCACCCTCA 14130 Query 1955 ACCACTATACTAATAGGTC-TGAATGGCCGCGCAGCGGGGCACACC--ACGTTTTCAGCT 2011 | || ||||| | |||| | |||||||||||||| |||| || || ||||||||| Sbjct 14131 ATGACAATACTCTTGGGTCGTTAATGGCCGCGCAGC--GGCATCCCTAACATTTTCAGCT 14188 Query 2012 GCCCATGACGTCAAT 2026 ||||| || ||||| Sbjct 14189 GCCCAGCAC-TCAAT 14202 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 8627293913646