Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Solanum_20melongena_20[genbank_20GCA_5F000787875.1_202014-09-30] 33,873 sequences; 833,080,760 total letters Query= NC_010439.1 Length=2723 Score E Sequences producing significant alignments: (Bits) Value seq19028 280 3e-72 >seq19028 Length=31091 Score = 280 bits (310), Expect = 3e-72 Identities = 529/778 (68%), Gaps = 32/778 (4%) Strand=Plus/Plus Query 1560 AATGGTTGTGTGATGGTGATGAATTCTGCATTTTTTAGTGCCCANNNNNNNNNNNNNNNN 1619 |||||||||||||||||| |||||||||||| | | | ||| Sbjct 13768 AATGGTTGTGTGATGGTGTAGAATTCTGCATTATGCAAAGACCAATTTTTTAATTTAATA 13827 Query 1620 NNNNNNTCCTCATCCAAGTACTCTTTATACGATGATGTAGGACCAGGATTGCAGAGGAAG 1679 ||||| || | | |||||||||| || ||||||||||||||||| | |||| Sbjct 13828 TTTTTTTCCTCCTCGAGGAACTCTTTATAGCTGGAAGTAGGACCAGGATTGCACAAGAAG 13887 Query 1680 ATAGTGGGTATTCCACCTTTAATTTGAATTGGTTTCCCGTACTTCGTGTTGCTTTGCCAG 1739 || || ||||| ||||| || || | | || | ||||| || ||||| ||| Sbjct 13888 ATTGTCGGTATCCCACCCTTTATCTTTACAGGCCTTCCGTATTTTACCTTGCTGGACCAA 13947 Query 1740 TCTCTTTGGGCCCCCATGAACTCTTTAAAATGCTTTAGATAATGCGGATCAACGTCATCA 1799 | |||||||||||||| ||||||||||| |||||||||||||||||||| |||| |||| Sbjct 13948 TTGCTTTGGGCCCCCATAAACTCTTTAAAGTGCTTTAGATAATGCGGATCGACGTTATCA 14007 Query 1800 ATGACGTTATACCAAGCATCATTGCTGTAAACCTTTGGGCTTAGGTCCAAATGTCCGCAT 1859 |||| ||||||||| |||| ||| |||| || | | || ||||| |||||| Sbjct 14008 ATGATGTTATACCAGGCATTATTTGAATAAATTTTATTATTCAAATCTAAATGACCGCAT 14067 Query 1860 AGATAATTGTGTTGGCCCAGAGATCTAGCCCACATCGTCTTTCCTGTTCTACTATTGCCT 1919 || ||||| ||| | || | |||||| |||||| ||||| ||||||||| | || Sbjct 14068 AGGTAATTATGTGGTCCTAAAGATCTTGCCCACTCTGTCTTCCCTGTTCTAGACTCACCC 14127 Query 1920 TCTATTACAATACTTATGGG-CCTCCAAGGCCGCGCAGCGGCATCCCTGACATTCTCGGA 1978 || || |||||||| |||| | | | |||||||||||||||||||| ||||| || | Sbjct 14128 TCAATGACAATACTCTTGGGTCGTTAATGGCCGCGCAGCGGCATCCCTAACATTTTCAGC 14187 Query 1979 AACCCATTCTTCAAGTTCTTTTGGAACTTGATCGAAAGAAGAAGGAAGAAAAGGACAAAC 2038 |||| |||| ||| | ||| |||||| | |||||||| ||| Sbjct 14188 TGCCCAGCACTCAA------TTG--------TTGAAGGAAGAACAACTAAAAGGACTAAC 14233 Query 2039 AAAAACCTCTAAAGGA-GGTGCA--AAAATTCTATCTAAATTCGCATTTAAATTGTGAAA 2095 | || || |||| || ||| || |||| |||||| || | | || ||| ||| | Sbjct 14234 ATAAGGTTC---AGGAGGGGGCATGAATATTCGATCTAATTTTGGAACTATATTATGATA 14290 Query 2096 TTGTAAAATATAATCTTTAGGGGC--TAATTCTCTAATTACATTAAGAGCCTCCGACTTA 2153 ||| ||||| || |||| ||| | ||||||||| | | ||| || || | | Sbjct 14291 TTG--AAATAGAAACTTTGCTGGCATTTTTTCTCTAATAATAGAAAGCGCTTC---TTCA 14345 Query 2154 CTTCCTGTGTTAATT---GCTTTGGCGTAAGCATCATTGGCTGTTTGTTGACCCCCTCTA 2210 || ||| | || |||| || | ||||||| | ||| ||| ||| |||||| Sbjct 14346 ATTGATGTAGCACTTAACGCTTCTGCAGATACATCATTTGTTGTATGTGAACCTCCTCTA 14405 Query 2211 GCAGATCTTCCGTCGACCTGAAACTCACCCCATTCGACGGTGTCTCCGTCTTTATCAATA 2270 ||||||| ||| |||| ||||| | ||||| ||| | || | |||||| | || Sbjct 14406 GCAGATCGTCCATCGATTTGAAAATTGCCCCAGTCGGTGTAATCACAGTCTTTCGCGATG 14465 Query 2271 TAGGATTTGACGTCGGAGCTTGATTTAGCTCCCTGAATGTTTGGATGGAAATGTGCTG 2328 || || || || || ||||||||| || | |||||| ||| ||||| || Sbjct 14466 TATTTCTTAACATCTGAAGATGATTTAGCGGATTGGAAGTTTGGGTGG-TATGTGGTG 14522 Score = 217 bits (240), Expect = 3e-53 Identities = 271/368 (74%), Gaps = 5/368 (1%) Strand=Plus/Plus Query 934 CACACAGAAAATGCTTTGTTGTTATATATGGCATGTACTCATGCTAGTAATCCAGTGTAT 993 || || |||||||| ||||||| |||| | |||||||| |||||| || ||| Sbjct 13084 CATACTGAAAATGCATTGTTGT---ATATTAGTTCAACTCATGCATCTAATCCTGTATAT 13140 Query 994 GCTACGTTGAAGATCA-GAATCTATTTCTATGATTCTGTTCAAAATTAATAAATATTGAA 1052 ||| ||| || || | | ||||| ||||| ||| |||||||||||||||||| Sbjct 13141 TGTACTATGA-GAACACGCAGTTATTTTTATGAGAGTGTATCAAATTAATAAATATTGAA 13199 Query 1053 TTTTATTATATGAGAAATTTGTACATCGATTGTTTTTTCAAGTACATCGTATAGTACATA 1112 ||||||| |||| | ||||||| | ||||| |||| ||||| | ||| ||||| Sbjct 13200 TTTTATTTCATGATATTCAAGTACATCCACTGTTTGCTCAATTACATTGAATAATACATT 13259 Query 1113 GTCGAATGCCCTAATTACATTGTTTATGCTAATAACTCCTAAACTATCTAAATATTTCAT 1172 ||| | || ||||| | |||||| || |||||||| ||||| | |||||| ||||||| Sbjct 13260 GTCTACAGCTCTAATAATATTGTTAATACTAATAACACCTAATCGGTCTAAAAATTTCAT 13319 Query 1173 ACAATGATATTTAAATACTCTTAAGAAACGCCAAGTCTGAGGACGTAAACGAGTCCAGAT 1232 | || |||||||||||||||||||| | ||| |||||||||||||||||| ||| Sbjct 13320 TACACGAAATTTAAATACTCTTAAGAAAACGTATGTCGGAGGACGTAAACGAGTCCTGAT 13379 Query 1233 TTTGCAGATCAGAAAACATTGATGTATTCCCAACGCTTTCCTCAGGTTGTGGTTGAACTG 1292 ||| || | || ||| || || | || | |||||||||||||||||||| | Sbjct 13380 CTTGAAGTTGAGGAAAGCTTTGTGAAGATTCAGTTCCTTCCTCAGGTTGTGGTTGAATCG 13439 Query 1293 TATTTGTA 1300 ||||||| Sbjct 13440 AATTTGTA 13447 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 8601703127102