Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Solanum_20melongena_20[genbank_20GCA_5F000787875.1_202014-09-30] 33,873 sequences; 833,080,760 total letters Query= NC_010618.1 Length=2747 Score E Sequences producing significant alignments: (Bits) Value seq19028 434 2e-118 >seq19028 Length=31091 Score = 434 bits (480), Expect = 2e-118 Identities = 986/1471 (67%), Gaps = 109/1471 (7%) Strand=Plus/Plus Query 954 TCATACTGAGAATGCATTATTGTTGTATATGGTGTCTACTCATGCGAGTAATCCTGTATA 1013 ||||||||| |||||||| ||||||||| || |||||||| |||||||||||| Sbjct 13083 TCATACTGAAAATGCATT---GTTGTATATTAGTTCAACTCATGCATCTAATCCTGTATA 13139 Query 1014 TGCGACTTTGAAAGTCCGCATCTATTTCTATGATTCACAAATGAATTAATAAATATTGAA 1073 | ||| ||| | |||| ||||| ||||| | ||||||||||||||||| Sbjct 13140 TTGTACTATGAGAACACGCAGTTATTTTTATGAGAGTGTATCAAATTAATAAATATTGAA 13199 Query 1074 TTTTATATCATGATTTTCAATTACATCTATTGTTCCATTCAATACATCGTATAATACATA 1133 |||||| ||||||| ||||| |||||| | |||| | | ||||| | ||||||||| Sbjct 13200 TTTTATTTCATGATATTCAAGTACATCCACTGTTTGCTCAATTACATTGAATAATACATT 13259 Query 1134 -TCTAAAAGCCCTAATACAATTGTTAATGCTAATCACGCCTAATCTATCTAAATATTTAA 1192 |||| | || |||||| ||||||||| ||||| || ||||||| |||||| |||| | Sbjct 13260 GTCTACA-GCTCTAATAATATTGTTAATACTAATAACACCTAATCGGTCTAAAAATTTCA 13318 Query 1193 GAAATTGGTATTTAAATACTCTTAAGAAACGCGAGGTCTGAGGATGTAAATGAGTCCAGA 1252 | | |||||||||||||||||||| | ||| ||||| ||||| |||||| || Sbjct 13319 TTACACGAAATTTAAATACTCTTAAGAAAACGTATGTCGGAGGACGTAAACGAGTCCTGA 13378 Query 1253 TTTGGCAGGTTAGAAAACATTTGTGTATCCCCAACGCTTTCCTCAGGTTGTAGTTGAATT 1312 | | | || | || ||| |||||| | || | ||||||||||||| ||||||| Sbjct 13379 TCTTGAAGTTGAGGAAAGCTTTGTGAAGATTCAGTTCCTTCCTCAGGTTGTGGTTGAATC 13438 Query 1313 GGACTTGTAATGTGATGATGTCGTGTTTCCTCAGAAAT----GGTCTCTCGTGGTGTTTG 1368 | | ||||| | ||| |||||| | || ||| | ||||| | ||| ||| Sbjct 13439 GAATTTGTATTTCGATTATGTCGGTTGTC----GAATTTGTTGGTCTGAGATTGTGGTTG 13494 Query 1369 GTTATCTTGAAATATAG-----GGGATTTTTGACC---------GTCCAGATATAC---- 1410 |||||||||||||| | | | || || || | || || Sbjct 13495 AGGATCTTGAAATATAGAAACAGCTAATATTTCCCAAATATGTGGTTGACGTAAACGACT 13554 Query 1411 --ACGCCATTCTCTGATTGAGTTGCAGTGA-GTAGTTCCCCGGTGCGTGAATCCATGATT 1467 ||||||||| | ||| ||||||| ||| |||||| |||||| |||||||| Sbjct 13555 AGACGCCATTCATCGCTTGTTGAGCAGTGATGTA-TTCCCCTGTGCGTATATCCATGACC 13613 Query 1468 GTGACAGCCTAAAGCAACGAAGTATGAACAGCCACAAGGTAGATCAACTCGTCGTCGTCT 1527 ||||| | | ||| |||||| |||||||| || || | ||||| || ||| Sbjct 13614 AGAACAGCTAATATTTTTGAATATTGAACATCCACAAGGCAGGTCTAGTCGTCTTCTTCT 13673 Query 1528 GGTTG---TCTTCTTGGCAAT----TCTGT-------GTTGCA--CCTTG---------- 1561 | || |||||||| | | ||| ||||| ||||| Sbjct 13674 GATTTGTCTCTTCTTGATATCCGGATATGTAAATGAGGTTGCTTTCCTTGTATAATGTCT 13733 Query 1562 --------ATAGGAA--------CCTGA--GTAGAGTGGCCCGTTGAGGGTGACGAATTG 1603 || || | |||| | | | ||| ||| |||| ||||| Sbjct 13734 ATGCATCCATTGGGATAACATTTCCTGCACGAATAATGGTTGTGTGATGGTGTAGAATTC 13793 Query 1604 TGCATTTTTTAAAGCCCAATCTTTGAGTGCGGAATTCTTTTCCTCTTCTAGATACTCTTT 1663 |||||| | |||| ||||| ||| | | ||| |||||||| || || ||||||| Sbjct 13794 TGCATTATGCAAAGACCAATTTTTTAATTTAATATTTTTTTCCTCCTCGAGGAACTCTTT 13853 Query 1664 ATAGCTGGAATTGGGTCCTGGATTGCAAAGGAAGATAGTTGGAATTCCACCTTTAATTTG 1723 |||||||||| | || || |||||||| | |||||| || || || ||||| || || | Sbjct 13854 ATAGCTGGAAGTAGGACCAGGATTGCACAAGAAGATTGTCGGTATCCCACCCTTTATCTT 13913 Query 1724 AATTGGCTTCCCGTACTTTGTGTTGCTTTGCCAGTCCCTTTGGGCCCCCATGAATTCCTT 1783 | ||| | ||||| ||| ||||| ||| | |||||||||||||| || || || Sbjct 13914 TACAGGCCTTCCGTATTTTACCTTGCTGGACCAATTGCTTTGGGCCCCCATAAACTCTTT 13973 Query 1784 AAAGTGCTTTAGGTAGTGGGGATCGACGTCATCAATGACGTTATACCATGCATCATTCCT 1843 |||||||||||| || || |||||||||| |||||||| ||||||||| |||| ||| | Sbjct 13974 AAAGTGCTTTAGATAATGCGGATCGACGTTATCAATGATGTTATACCAGGCATTATT--T 14031 Query 1844 GTATACCTTT--GGACTGAGATCCAAATGTCCGCACAGATAATTATGTAGTCCTAATGAC 1901 | ||| ||| | | | ||| ||||| ||||| || ||||||||| ||||||| || Sbjct 14032 GAATAAATTTTATTATTCAAATCTAAATGACCGCATAGGTAATTATGTGGTCCTAAAGAT 14091 Query 1902 CTGGCCCACATAGTCTTCCCCGTTCTACTATCACCCTCTATGACTATACTTATCGGTC-T 1960 || |||||| |||||||| |||||| |||||||| ||||| ||||| | |||| | Sbjct 14092 CTTGCCCACTCTGTCTTCCCTGTTCTAGACTCACCCTCAATGACAATACTCTTGGGTCGT 14151 Query 1961 TAAAGGCCGCGCAGCGGCATCCCTTACATTATCGGAAACCCATTCTTCAAGTTCTTCTGG 2020 ||| |||||||||||||||||||| ||||| || | |||| |||| Sbjct 14152 TAATGGCCGCGCAGCGGCATCCCTAACATTTTCAGCTGCCCAGCACTCAA---------- 14201 Query 2021 AACTTGATCAAACGATGAAGATAAAAAAGGACAACTAAAAATCTCTAATGGAGGTGCA-- 2078 ||| | || || ||| | |||||||| | | || || | | || ||| Sbjct 14202 ---TTG-TTGAAGGAAGAACAACTAAAAGGACTAACATAAGGTTC--AGGAGGGGGCATG 14255 Query 2079 AAAATCCTATCTAAATTGGAATTTAAATTATGAAATTGTAATACATAATCCTTGGGGGC- 2137 || || | |||||| || | | || ||||||| |||| ||| | || | ||| ||| Sbjct 14256 AATATTCGATCTAATTTTGGAACTATATTATGATATTGAAAT--AGAAACTTTGCTGGCA 14313 Query 2138 -TAATTCTTTAATTACATTAAGAGCCTC-TGACTTACTGCTGCTGTTAAGCGCCTTGGCG 2195 | |||| |||| | | ||| || || | | || || || |||| ||| | || Sbjct 14314 TTTTTTCTCTAATAATAGAAAGCGCTTCTTCAATTGATGTAGCACTTAA-CGCTTCTGCA 14372 Query 2196 TAAGCGTCGTTGGCTGATTGCTGTCCCCCTCTTGCAGATCTTGCATCGATTTGAAACTCT 2255 | | || || | || || || ||||| ||||||| | ||||||||||||| | Sbjct 14373 GATACATCATTTGTTGTATGTGAACCTCCTCTAGCAGATCGTCCATCGATTTGAAAATTG 14432 Query 2256 CCCCAATCGATGATGTCTCCGTCTTTCTTGATATAGGACTTGACGTCGGAGCTGGATTTA 2315 ||||| ||| || || | ||||||| ||| || ||| || || || |||||| Sbjct 14433 CCCCAGTCGGTGTAATCACAGTCTTTCGCGATGTATTTCTTAACATCTGAAGATGATTTA 14492 Query 2316 GCTCCCTGAATGTTTGGATGGAAATGTGCTG 2346 || || | |||||| ||| ||||| || Sbjct 14493 GCGGATTGGAAGTTTGGGTGG-TATGTGGTG 14522 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 8678475486734