Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Solanum_20melongena_20[genbank_20GCA_5F000787875.1_202014-09-30] 33,873 sequences; 833,080,760 total letters Query= NC_010647.1 Length=2630 Score E Sequences producing significant alignments: (Bits) Value seq19028 127 3e-26 >seq19028 Length=31091 Score = 127 bits (140), Expect = 3e-26 Identities = 278/409 (68%), Gaps = 13/409 (3%) Strand=Plus/Plus Query 1469 TGTGAAGGTGATGAATAGCGCATTATGAATGGTCCAGTTGTGTAAAGCTCGGTTTTCTTC 1528 ||||| |||| |||| |||||||| | | ||| || | ||| |||| ||| Sbjct 13776 TGTGATGGTGTAGAATTCTGCATTATGCAAAGACCAATTTTTTAATTTAATATTTTTTTC 13835 Query 1529 TTTACCGAGGAAGTCTTTATAACTGGCACCCTCACCAGGATTGCACAGCACGATTGAAGG 1588 | ||||||| |||||||| |||| | |||||||||||||| | ||||| || Sbjct 13836 CTCCTCGAGGAACTCTTTATAGCTGGAAGTAGGACCAGGATTGCACAAGAAGATTGTCGG 13895 Query 1589 GATACCTCCTTTAATTTGAACCGGCTTTCCATATTTACAGTTTGACTG--CCAGTCCCTT 1646 || || || || || | || ||| |||| ||||| | ||| ||| ||| | ||| Sbjct 13896 TATCCCACCCTTTATCTTTACAGGCCTTCCGTATTT-TACCTTG-CTGGACCAATTGCTT 13953 Query 1647 TGAGCCCCAATTAACTCTTTCCAATGCTTTAATTTCAAATAATTGGGGCTTATGTCATCA 1706 || ||||| || |||||||| | |||||| | ||||| || | || |||| Sbjct 13954 TGGGCCCCCATAAACTCTTTAAAGTGCTTT------AGATAATGCGGATCGACGTTATCA 14007 Query 1707 ATGACGTTGTACTCAGCGGCATTGGAATAGACACGCGAATTGAAGTCGAGGTGACC-CAT 1765 |||| ||| ||| || ||| ||||| | ||| || || | ||||| ||| Sbjct 14008 ATGATGTTATACCAGGCATTATTTGAATAAATTTTATTATTCAAATCTAAATGACCGCAT 14067 Query 1766 GAGATAATTGTGTGGTCCCAATGAACGAGCCCACATTGTTTTGCCTGTTCTTGAGTCACC 1825 || ||||| |||||||| || || | |||||| ||| || |||||||| || ||||| Sbjct 14068 -AGGTAATTATGTGGTCCTAAAGATCTTGCCCACTCTGTCTTCCCTGTTCTAGACTCACC 14126 Query 1826 CTCGACGATGATACTCATATATC-TCTCCGGCCGCGCAGCGGCACCCCT 1873 ||| | || |||||| | || | ||||||||||||||| |||| Sbjct 14127 CTCAATGACAATACTCTTGGGTCGTTAATGGCCGCGCAGCGGCATCCCT 14175 Score = 78.8 bits (86), Expect = 2e-11 Identities = 107/149 (72%), Gaps = 3/149 (2%) Strand=Plus/Plus Query 849 GAATCATACGGAGAACGCCTTATTATTGTATATGGCATGTACACATGCCTCAAACCCTGT 908 || |||||| || || || ||| |||||||| | || ||||| || || ||||| Sbjct 13080 GACTCATACTGAAAATGC---ATTGTTGTATATTAGTTCAACTCATGCATCTAATCCTGT 13136 Query 909 ATATGCAACATTGAAAATTCGGATCTATTTCTATGATTCGATAACAAATTAATAAAATTT 968 |||| || ||| || || | ||||| ||||| || |||||||||||| || Sbjct 13137 ATATTGTACTATGAGAACACGCAGTTATTTTTATGAGAGTGTATCAAATTAATAAATATT 13196 Query 969 GAATTTTATTTCATGACTTTCGAGCACAT 997 |||||||||||||||| ||| || |||| Sbjct 13197 GAATTTTATTTCATGATATTCAAGTACAT 13225 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 8304210233528