Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Solanum_20melongena_20[genbank_20GCA_5F000787875.1_202014-09-30] 33,873 sequences; 833,080,760 total letters Query= NC_010791.1 Length=2738 Score E Sequences producing significant alignments: (Bits) Value seq19028 212 1e-51 >seq19028 Length=31091 Score = 212 bits (234), Expect = 1e-51 Identities = 269/369 (73%), Gaps = 1/369 (0%) Strand=Plus/Plus Query 1647 TCCTCGTCTAAGTATTCTTTATAGGACGAAGTTGGGCCTGGATTGCAGAGGAAGATAGTG 1706 ||||| || | | | ||||||||| ||||| || || |||||||| | |||||| || Sbjct 13834 TCCTCCTCGAGGAACTCTTTATAGCTGGAAGTAGGACCAGGATTGCACAAGAAGATTGTC 13893 Query 1707 GGAATACCACCTTTAATTTGAATTGGTTTCCCGTATTTGGTGTTGCTTTGCCAGTCCCTT 1766 || || ||||| || || | | || | |||||||| ||||| ||| | ||| Sbjct 13894 GGTATCCCACCCTTTATCTTTACAGGCCTTCCGTATTTTACCTTGCTGGACCAATTGCTT 13953 Query 1767 TGGGCCCCCATGAACTCTTTAAAGTGCTTTAAGTAGTGGGGGTCTACATCATCAATCACG 1826 ||||||||||| ||||||||||||||||||| || || || || || | |||||| | | Sbjct 13954 TGGGCCCCCATAAACTCTTTAAAGTGCTTTAGATAATGCGGATCGACGTTATCAATGATG 14013 Query 1827 TTGTACCAGGCATCATTATTGTACACTCTTGGACTGAGGTCTAAGTGACCACATAGATAA 1886 || |||||||||| ||| || | | | | | | ||||| ||||| ||||| ||| Sbjct 14014 TTATACCAGGCATTATTTGAATAAATTTTATTATTCAAATCTAAATGACCGCATAGGTAA 14073 Query 1887 TTATGTGGCCCCAACGACCTGGCCCACATTGTTTTGCCAGTACGACTCTCGCCCTCGATT 1946 |||||||| || || || || |||||| ||| || || || | | ||| ||||| || Sbjct 14074 TTATGTGGTCCTAAAGATCTTGCCCACTCTGTCTTCCCTGTTCTAGACTCACCCTCAATG 14133 Query 1947 ACAATGCTAATGGGTC-TCCACGGCCGCGCAGCGGCATCTTTGATGTTATCTGCAACCCA 2005 ||||| || |||||| | | ||||||||||||||||| | | || || || |||| Sbjct 14134 ACAATACTCTTGGGTCGTTAATGGCCGCGCAGCGGCATCCCTAACATTTTCAGCTGCCCA 14193 Query 2006 GCACTCAAT 2014 ||||||||| Sbjct 14194 GCACTCAAT 14202 Score = 159 bits (176), Expect = 6e-36 Identities = 273/388 (70%), Gaps = 11/388 (3%) Strand=Plus/Plus Query 954 GAATCATACTGAGAATGCTCTATTGTTGTATATGGCTTGTACACATTCTAGTAATCCCGT 1013 || ||||||||| ||||| |||||||||||| || || ||| | |||||| || Sbjct 13080 GACTCATACTGAAAATGC---ATTGTTGTATATTAGTTCAACTCATGCATCTAATCCTGT 13136 Query 1014 GTATGCAACTTTGAAAATCAGGATCTATTTTTATGATTCTGTCAGTAATTAATAAAGATT 1073 ||| ||| ||| || | | ||||||||||| ||| |||||||||| ||| Sbjct 13137 ATATTGTACTATGAGAACACGCAGTTATTTTTATGAGAGTGTATCAAATTAATAAATATT 13196 Query 1074 GAATTTTATTATATGTGAT--AACTCAGCATCAATTGTGCCGTCAAGTACATCGTACAAT 1131 |||||||||| ||| || || | |||| | ||| |||| ||||| | | ||| Sbjct 13197 GAATTTTATTTCATGATATTCAAGTA--CATCCACTGTTTGCTCAATTACATTGAATAAT 13254 Query 1132 ACATA-TCTAATGGCTCTAACAACATTGTTAATACTAATGATTCCTAAATTATTTAAATA 1190 |||| |||| | |||||| || ||||||||||||||| | ||||| | |||| | Sbjct 13255 ACATTGTCTACAG-CTCTAATAATATTGTTAATACTAATAACACCTAATCGGTCTAAAAA 13313 Query 1191 CTT-AATACATTGATATCTAAATACATTTAAGAAACGCCAGGTCTGAGGACGTAAACGAG 1249 || | |||| || || ||||||| |||||||| | ||| ||||||||||||||| Sbjct 13314 TTTCATTACA-CGAAATTTAAATACTCTTAAGAAAACGTATGTCGGAGGACGTAAACGAG 13372 Query 1250 TCCAGATCCGGCAGGTCAGAAAACACTGGTGAATCCCCAACGCTTTCCTCAGGTTGTGGT 1309 ||| |||| | || | || ||| | ||||| || | |||||||||||||||| Sbjct 13373 TCCTGATCTTGAAGTTGAGGAAAGCTTTGTGAAGATTCAGTTCCTTCCTCAGGTTGTGGT 13432 Query 1310 TGAACTGGATCTGGAGTGTGATGATGTC 1337 |||| | || || | | ||| ||||| Sbjct 13433 TGAATCGAATTTGTATTTCGATTATGTC 13460 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 8649685851872