Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Solanum_20melongena_20[genbank_20GCA_5F000787875.1_202014-09-30] 33,873 sequences; 833,080,760 total letters Query= NC_010833.1 Length=2708 Score E Sequences producing significant alignments: (Bits) Value seq19028 134 2e-28 >seq19028 Length=31091 Score = 134 bits (148), Expect = 2e-28 Identities = 452/693 (65%), Gaps = 33/693 (5%) Strand=Plus/Plus Query 1612 TTTTCCTCTTTCTCGAGGAAATCTTTATAGCTGGCCCCCTCTCCAGGATTGCAGAGCACG 1671 |||||||| ||||||||| ||||||||||||| ||||||||||| | | | Sbjct 13831 TTTTCCTC---CTCGAGGAACTCTTTATAGCTGGAAGTAGGACCAGGATTGCACAAGAAG 13887 Query 1672 ATTGATGGGATACCGCCTTTAATTTGAACAGGCTTTCCGTATTTGCAATTTGACTG--CC 1729 |||| || || || || || || | |||||| |||||||||| | ||| ||| || Sbjct 13888 ATTGTCGGTATCCCACCCTTTATCTTTACAGGCCTTCCGTATTT-TACCTTG-CTGGACC 13945 Query 1730 AGTCCTTTTGAGCTCCCATCAATTCTTTCCAGTGCTTTAGCTTTAGGTAGTGCGGAGGGA 1789 | | |||| || ||||| || ||||| ||| ||||||| || |||||| || Sbjct 13946 AATTGCTTTGGGCCCCCATAAACTCTTTAAAGT------GCTTTAGATAATGCGGATCGA 13999 Query 1790 CGTCATCAATGACGTTATATTCAGCCTCATTTGAATAGACCCTGGAGTTGAAGTCCAGGT 1849 ||| |||||||| |||||| || | ||||||||| | | || || || | | Sbjct 14000 CGTTATCAATGATGTTATACCAGGCATTATTTGAATAAATTTTATTATTCAAATCTAAAT 14059 Query 1850 GTCCACTGAGATAGTTATGGGCCCCTAAAGCACGAGCCCACATTGTCTTGCCTGTTCGAC 1909 | || | || || ||||| | ||||||| | |||||| |||||| ||||||| | Sbjct 14060 GACCGCATAGGTAATTATGTGGTCCTAAAGATCTTGCCCACTCTGTCTTCCCTGTTCTAG 14119 Query 1910 TATCTCCTTCGACTATCAAACTAACAGG-CCTGCTGGGCCGCGCAGCGGCATCTCTTCCA 1968 || || || | | | ||| || | | ||||||||||||||||| || | Sbjct 14120 ACTCACCCTCAATGACAATACTCTTGGGTCGTTAATGGCCGCGCAGCGGCATCCCT---A 14176 Query 1969 AAATAGTCATCGGCCCACTCTTGCATCTCGTCGGGAACGTGAGTGAATGAGGAGAGTGGA 2028 | || ||| | ||||| ||| ||| || | |||| || || | Sbjct 14177 ACATTTTCAGCTGCCCA-----GCA-CTC------AA--TTGTTGAAGGAAGAACAACTA 14222 Query 2029 AACGGAGGAGACCAAGTTTCCGGAGCCTTTGCGAAAATGCGATCTAAATTACTATTTAGA 2088 || ||| | ||| ||| |||| ||| || |||||||| || | || | Sbjct 14223 AAAGGACTAACATAAGGTTCAGGAGGGGGCATGAATATTCGATCTAATTTTGGAACTATA 14282 Query 2089 TTATGGAATTGGAAGAGATACTTTTCCGGCAACTTCTCTCTGATTATGCTCAGCGCCGCT 2148 ||||| |||| || ||| ||||| | |||| || ||||| || || ||||| || Sbjct 14283 TTATGATATTGAAATAGAAACTTTGCTGGCATTTTTTCTCTAATAATAGAAAGCGCTTCT 14342 Query 2149 TCTTTCGACGGCGCGTTTAAGGCCTCTGCGGCAGCGTCGTTAGCTGTCTGGCAACCTCCT 2208 || | || | || |||| || ||||| | | || || | ||| || |||||||| Sbjct 14343 TCAATTGATGTAGCACTTAACGCTTCTGCAGATACATCATTTGTTGTATGTGAACCTCCT 14402 Query 2209 CTAGCACTTCTTCCGTCGACCTGGAAAACTCCCCATTCGACTGT-ATCTCCGTCCTTGTC 2267 |||||| || ||| |||| || ||| ||||| ||| ||| ||| | ||| || | Sbjct 14403 CTAGCAGATCGTCCATCGATTTGAAAATTGCCCCAGTCG-GTGTAATCACAGTCTTTCGC 14461 Query 2268 GACATAGGACTTGACGTCGGACGACGACTTAGC 2300 || || ||| || || || || || ||||| Sbjct 14462 GATGTATTTCTTAACATCTGAAGATGATTTAGC 14494 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 8553720402332