Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Solanum_20melongena_20[genbank_20GCA_5F000787875.1_202014-09-30] 33,873 sequences; 833,080,760 total letters Query= NC_010835.1 Length=2560 Score E Sequences producing significant alignments: (Bits) Value seq19028 150 3e-33 >seq19028 Length=31091 Score = 150 bits (166), Expect = 3e-33 Identities = 249/355 (70%), Gaps = 12/355 (3%) Strand=Plus/Plus Query 1466 TTTTCCTCTTTGGCTAGGAAATCTTTATAGCTGGCCCCCTCTCCAGGATTGCAGAGCACG 1525 |||||||| | | ||||| ||||||||||||| ||||||||||| | | | Sbjct 13831 TTTTCCTCCTCG---AGGAACTCTTTATAGCTGGAAGTAGGACCAGGATTGCACAAGAAG 13887 Query 1526 ATTGATGGGATACCCCCTTTAATTTGAACTGGCTTTCCGTACTTACAATTTGATTG-CCA 1584 |||| || || || || || || | || ||| ||||||| || | ||| | | ||| Sbjct 13888 ATTGTCGGTATCCCACCCTTTATCTTTACAGGCCTTCCGTATTTT-ACCTTGCTGGACCA 13946 Query 1585 ATCTATTTGGGCCCCAATCAATTCTTTCCAGTGCTTTAACTTTAAGTAATGCGGAGAGAC 1644 || |||||||||| || || ||||| ||||||||| | |||||||| ||| Sbjct 13947 ATTGCTTTGGGCCCCCATAAACTCTTTAAAGTGCTTTAGAT------AATGCGGATCGAC 14000 Query 1645 GTCATCAATGACGTTATACAGTACATCGTTTGAGTAAACCCTAGAATTGAAATCCAGGTG 1704 || |||||||| ||||||| ||| ||||| |||| || ||| ||||| | || Sbjct 14001 GTTATCAATGATGTTATACCAGGCATTATTTGAATAAATTTTATTATTCAAATCTAAATG 14060 Query 1705 TCCACTTAGATAGTTATGTGGGCCAAGTGCACGCGCCCACATCGTCTTCCCCGTCCGACT 1764 || | ||| || |||||||| || | | | |||||| |||||||| || | | Sbjct 14061 ACCGCATAGGTAATTATGTGGTCCTAAAGATCTTGCCCACTCTGTCTTCCCTGTTCTAGA 14120 Query 1765 ATTACCCTCGATGACAATACTTATAGGTC-TGATAGGCCGCGCAGCTGCATCCCT 1818 | |||||| ||||||||||| | |||| | | ||||||||||| |||||||| Sbjct 14121 CTCACCCTCAATGACAATACTCTTGGGTCGTTAATGGCCGCGCAGCGGCATCCCT 14175 Score = 96.9 bits (106), Expect = 6e-17 Identities = 236/353 (67%), Gaps = 15/353 (4%) Strand=Plus/Plus Query 819 TTATTGTATATGGCATGTACTCATGCCTCTAACCCTGTATATGCAACTTTAAAAATTCGG 878 || |||||||| | |||||||| ||||| ||||||||| ||| | | || || Sbjct 13099 TTGTTGTATATTAGTTCAACTCATGCATCTAATCCTGTATATTGTACTATGAGAACACGC 13158 Query 879 ATCTATTTTTATGATTCGATAACAAATTAATATAATTTAAATTTTATTGAATGATTTTCA 938 | ||||||||||| || |||||||||| | || ||||||||| ||||| |||| Sbjct 13159 AGTTATTTTTATGAGAGTGTATCAAATTAATAAATATTGAATTTTATTTCATGATATTCA 13218 Query 939 AGTACAGC----ATTTAC---ATATGATCTGTCTGTTGCAAAGCGAACAGCTCTAATTAC 991 |||||| | ||| | || || || | | || | ||||||||||| | Sbjct 13219 AGTACATCCACTGTTTGCTCAATTACAT-TGAATAATACATTGTCTACAGCTCTAATAAT 13277 Query 992 ATTATTAACTGAAATGACTCCTAACTGATCAATATACAACATTACTAAATATTTAAATCT 1051 ||| |||| ||| || ||||| | || | | | |||||| | |||||||| Sbjct 13278 ATTGTTAATACTAATAACACCTAATCGGTCTAAAAATTTCATTACACGAAATTTAAATAC 13337 Query 1052 ATTTAAGTAA--GTCGTCCCAGAAGCTGTCAGGGATGTCGTCCAGACTTGGAAGTTGAGA 1109 ||||| || || | | || | || | || |||| || | ||||||||| Sbjct 13338 TCTTAAGAAAACGT-ATGTCGGAGGACGTAAACGA----GTCCTGATCTTGAAGTTGAGG 13392 Query 1110 AATGCCTTGTGGAGACCCAGTGCTCTCCTCAGGTTGTGGTTGAACCTTATTTG 1162 || || ||||| ||| |||| | ||||||||||||||||||| | ||||| Sbjct 13393 AAAGCTTTGTGAAGATTCAGTTCCTTCCTCAGGTTGTGGTTGAATCGAATTTG 13445 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 8080290851268