Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Solanum_20melongena_20[genbank_20GCA_5F000787875.1_202014-09-30] 33,873 sequences; 833,080,760 total letters Query= NC_010837.1 Length=2666 Score E Sequences producing significant alignments: (Bits) Value seq19028 113 8e-22 >seq19028 Length=31091 Score = 113 bits (124), Expect = 8e-22 Identities = 424/658 (64%), Gaps = 33/658 (5%) Strand=Plus/Plus Query 1557 TTTTCCTCTCTGTCTAGGAACCTTTTATAGCTGGCCCCCTCGCCAGGATTGCAAAGCACG 1616 |||||||| || |||||| ||||||||||| ||||||||||| | | | Sbjct 13831 TTTTCCTCC---TCGAGGAACTCTTTATAGCTGGAAGTAGGACCAGGATTGCACAAGAAG 13887 Query 1617 ATGCATGGGATGCCCCCTTTAATTTGAACTGGTTTACCGTATTTACAATTTGACTG--CC 1674 || || || || || || || | || || | |||||||| | ||| ||| || Sbjct 13888 ATTGTCGGTATCCCACCCTTTATCTTTACAGGCCTTCCGTATTTT-ACCTTG-CTGGACC 13945 Query 1675 AGTCCTTCTGGGCCCCAATTAACTCTTTCCAGTGTTTCATCTTTAAATATTTGGGGTCCA 1734 | | | |||||||| || |||||||| |||| ||||| ||| | || || | Sbjct 13946 AATTGCTTTGGGCCCCCATAAACTCTTTAAAGTG------CTTTAGATAATGCGGATCGA 13999 Query 1735 CGTCATCAATAATATTGTAGTGTGCTTCGTTGGAATAGCACTTAGGGTTAAAGTCTAGGT 1794 ||| |||||| || || || || | || ||||| ||| || || |||| | Sbjct 14000 CGTTATCAATGATGTTATACCAGGCATTATTTGAATAAATTTTATTATTCAAATCTAAAT 14059 Query 1795 GACCACTTAAATAATTGTGGACCCCTAAAGCACCGGCCCACATCGTCTTCCCTGTTCGAG 1854 |||| | || ||||| || ||||||| | |||||| ||||||||||||| || Sbjct 14060 GACCGCATAGGTAATTATGTGGTCCTAAAGATCTTGCCCACTCTGTCTTCCCTGTTCTAG 14119 Query 1855 AATCACCTTCAATTATTATACTAATAGGTC-TCTCCGGCCGCGCAGCGGCACTTCTTCCG 1913 | ||||| ||||| | ||||| | |||| | ||||||||||||||| | || Sbjct 14120 ACTCACCCTCAATGACAATACTCTTGGGTCGTTAATGGCCGCGCAGCGGCA----TCCCT 14175 Query 1914 AA-ATAATCGTCCGCCCAAGCTTGCATCTCTTCTGGCACGTTAGTGAATGATGACAGTGG 1972 || || || | ||||| ||| ||| || |||| || || Sbjct 14176 AACATTTTCAGCTGCCCA-----GCA-CTC--------AATTGTTGAAGGAAGAACAACT 14221 Query 1973 AAACGGAGGAACCCATGGCTCTGGAATTGATTTAAATATCCGTTGAGCATTTGCAACTAG 2032 ||| ||| ||| | || || ||| | | ||||| || | |||| ||||| Sbjct 14222 AAAAGGACTAACATAAGGTTCAGGAGGGGGCATGAATATTCGATCTAATTTTGGAACTAT 14281 Query 2033 GTTGTGATATTGGAGGAAGAAGTGTTGTGGCTGTTCCTCCTTTATTATATCAAGAGCCTG 2092 || |||||||| | | || | | |||| || || | || ||| ||| || | Sbjct 14282 ATTATGATATTGAAATAGAAACTTTGCTGGCATTTTTTCTCTAATAATAGAAAGCGCTTC 14341 Query 2093 TTCCACGGACGATGTGTTTAACGCCTTTGAGTATGAATCGTTAGCTGTCTGTTTACCTCC 2152 ||| | || | | ||||||| | || || ||| || | ||| ||| |||||| Sbjct 14342 TTCAATTGATGTAGCACTTAACGCTTCTGCAGATACATCATTTGTTGTATGTGAACCTCC 14401 Query 2153 TCGAGCAGATCTTCCGTCGATCTGAAAATTACCCCATTCGATGTAATCTCCGTCCTTC 2210 || |||||||| ||| ||||| |||||||| ||||| ||| ||||||| | ||| ||| Sbjct 14402 TCTAGCAGATCGTCCATCGATTTGAAAATTGCCCCAGTCGGTGTAATCACAGTCTTTC 14459 Score = 104 bits (114), Expect = 4e-19 Identities = 383/594 (64%), Gaps = 56/594 (9%) Strand=Plus/Plus Query 900 ATTGTTGTATATGGCATGTACTCATGCCTCTAATCCTGTGTATGCTACGTTAAAGATACG 959 |||||||||||| | |||||||| ||||||||||| ||| ||| | | | ||| Sbjct 13098 ATTGTTGTATATTAGTTCAACTCATGCATCTAATCCTGTATATTGTACTATGAGAACACG 13157 Query 960 GATCTATTTTTACGATTCGATATCAAATTAATAAATTCTGAATTTTATTGAATGTTGTTC 1019 | |||||||| || |||||||||||||||| ||||||||||| ||| | ||| Sbjct 13158 CAGTTATTTTTATGAGAGTGTATCAAATTAATAAATATTGAATTTTATTTCATGATATTC 13217 Query 1020 AAGTACA-----TGATGGAT-ATATGCTTTGTCTGTTGCAAAGCGAACTGCTCTAATTAC 1073 ||||||| || | | | | | | ||| | | || | || |||||||| | Sbjct 13218 AAGTACATCCACTGTTTGCTCAATTACATTGAATAATACATTGTCTACAGCTCTAATAAT 13277 Query 1074 ATTGTTAATCGAAATTACACCTGAACGGT-TAAGA-------TACAACATAACTAAATAC 1125 ||||||||| ||| |||||| | |||| ||| | |||| | | ||||||| Sbjct 13278 ATTGTTAATACTAATAACACCTAATCGGTCTAAAAATTTCATTACACGAAATTTAAATAC 13337 Query 1126 TGGAATCTATTTAAGTATGTCGTCCCAGAAGCTGTCAGGGAAGTCGTCCAGACTTGGAAG 1185 | | | | |||||||| || | || | || |||| || | |||| Sbjct 13338 TCTTAAGAA--AACGTATGTCG-----GAGGACGTAAACGA----GTCCTGATCTTGAAG 13386 Query 1186 TTCAGATACGCCTTGTGGAGATCCAACGCTTTCCGCACGTTGTGGTTGAACCGGATCTGT 1245 || || | || ||||| |||| || | |||| || |||||||||||| || || ||| Sbjct 13387 TTGAGGAAAGCTTTGTGAAGATTCAGTTCCTTCCTCAGGTTGTGGTTGAATCGAATTTGT 13446 Query 1246 ATGT-GATACACTCG--AGTCG---TTGTGTATCTGATGTCCTCTACTTG-GTACGTCTT 1298 || | ||| ||| |||| |||| ||||| | | | ||| | | |||| Sbjct 13447 ATTTCGATTATGTCGGTTGTCGAATTTGTTGGTCTGAGAT--TGTGGTTGAGGA--TCTT 13502 Query 1299 GAAATAGAG-GGGATTTGGTGTCTCCCAGATA-------------------TAGACGCCA 1338 |||||| || | | | | ||||| ||| ||||||||| Sbjct 13503 GAAATATAGAAACAGCTAATATTTCCCAAATATGTGGTTGACGTAAACGACTAGACGCCA 13562 Query 1339 TTCTCCGCCTGAGGTGCAGTGATGAGTTCCCCTGTGCGTGAATCCATGTCCTCTGCAGTT 1398 ||| ||| || | ||||||||| ||||||||||||| ||||||| || ||| | Sbjct 13563 TTCATCGCTTGTTGAGCAGTGATGTATTCCCCTGTGCGTATATCCATGACCAGAACAGCT 13622 Query 1399 AATATGGAGAAATATGGAACAGCCACAAACTAAATCAATTCGTCTTCTCCTAAT 1452 ||||| ||||| ||||| |||||| | || | ||||||||| || || Sbjct 13623 AATATTTTTGAATATTGAACATCCACAAGGCAGGTCTAGTCGTCTTCTTCTGAT 13676 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 8419368772976