Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Solanum_20melongena_20[genbank_20GCA_5F000787875.1_202014-09-30] 33,873 sequences; 833,080,760 total letters Query= NC_010947.1 Length=2755 Score E Sequences producing significant alignments: (Bits) Value seq19028 271 1e-69 >seq19028 Length=31091 Score = 271 bits (300), Expect = 1e-69 Identities = 502/727 (69%), Gaps = 26/727 (4%) Strand=Plus/Plus Query 1632 TTTAATGCAGCATTTTTGTCCTCGTCCAAGTACTCTTTATATGATGATGTCGGTCCTGGA 1691 |||||| | |||||| ||||| || | | |||||||||| || || || || ||| Sbjct 13816 TTTAATTTAATATTTTTTTCCTCCTCGAGGAACTCTTTATAGCTGGAAGTAGGACCAGGA 13875 Query 1692 TTGCAGAGGAAGATTGTAGGGATCCCACCTTTAATTTGAATTGGTTTCCCGTACTTCGTG 1751 ||||| | ||||||||| || |||||||| || || | | || | ||||| || Sbjct 13876 TTGCACAAGAAGATTGTCGGTATCCCACCCTTTATCTTTACAGGCCTTCCGTATTTTACC 13935 Query 1752 TTGCTTTGCCAGTCCCTTTGGGCCCCCATGAATTCTTTAAAGTGCTTTAGGTAGTGGGGG 1811 ||||| ||| | |||||||||||||| || ||||||||||||||||| || || || Sbjct 13936 TTGCTGGACCAATTGCTTTGGGCCCCCATAAACTCTTTAAAGTGCTTTAGATAATGCGGA 13995 Query 1812 TCGACATCATCAATGACGTTGTACCACGCGTCATTTGAATAAACCTTAGGGCTTAAGTCC 1871 ||||| | |||||||| ||| ||||| || | ||||||||||| ||| | || || Sbjct 13996 TCGACGTTATCAATGATGTTATACCAGGCATTATTTGAATAAATTTTATTATTCAAATCT 14055 Query 1872 AGGTGACCACACAAATAATTGTGTGGACCTAACGACCTAGCCCACATGGTCTTGCCGGTA 1931 | ||||| || | ||||| ||||| ||||| || || |||||| ||||| || || Sbjct 14056 AAATGACCGCATAGGTAATTATGTGGTCCTAAAGATCTTGCCCACTCTGTCTTCCCTGTT 14115 Query 1932 CGACTATCGCCCTCTATTACAATACTAATCGGTC-TCCAAGGCCGCGCAGCGGCACTCTT 1990 | | || ||||| || |||||||| | |||| | | ||||||||||||||| | | Sbjct 14116 CTAGACTCACCCTCAATGACAATACTCTTGGGTCGTTAATGGCCGCGCAGCGGCATCCCT 14175 Query 1991 CACATTCTCAGAGACCCAGACCCCAAGTTCCTCGGGAACTTGATTAAAAGAAGAAGAAAG 2050 ||||| |||| ||||| || ||| | ||| || || |||||| || Sbjct 14176 AACATTTTCAGCTGCCCAG----CA-----CTC----AATTG-TTGAAGGAAGAACAACT 14221 Query 2051 AAAAGGAGAAACATAAACCTCCAATGGAGGTGTAAAAATCCTATCTAAATTTGAATTTAA 2110 ||||||| ||||||| || || || | || || | |||||| |||| | || Sbjct 14222 AAAAGGACTAACATAAGGTTCAGGAGGGGGCATGAATATTCGATCTAATTTTGGAACTAT 14281 Query 2111 ATTATGAAACTGAAAAATATAATCTTT--TGGGAGTTTCTCCCTTATTATTGCTAATGCA 2168 ||||||| | || ||||| || |||| ||| | ||| || || || || | || || Sbjct 14282 ATTATGATATTG--AAATAGAAACTTTGCTGGCATTTTTTCTCTAATAATAG--AAAGC- 14336 Query 2169 GCTTCTT---TTGAACCTGCATTTAACGCCTCTGCACATGCGTCATTAGCATTCTGGCAG 2225 ||||||| |||| ||| ||||||| |||||| || | ||||| | | || | Sbjct 14337 GCTTCTTCAATTGATGTAGCACTTAACGCTTCTGCAGATACATCATTTGTTGTATGTGAA 14396 Query 2226 CCTCCCCTAGCACTTCTTCCGTCGACCTGGAACTGACCCCATTCAATGGTGTCTCCATCC 2285 ||||| |||||| || ||| |||| || || | ||||| || || || | || Sbjct 14397 CCTCCTCTAGCAGATCGTCCATCGATTTGAAAATTGCCCCAGTCGGTGTAATCACAGTCT 14456 Query 2286 TTGTCGATGTAGGACTTGACATCGGAGCTGGATTTAGCTCCCTGAATGTTTGGATGGAAA 2345 || ||||||| ||| ||||| || |||||||| || | |||||| ||| | Sbjct 14457 TTCGCGATGTATTTCTTAACATCTGAAGATGATTTAGCGGATTGGAAGTTTGGGTGG-TA 14515 Query 2346 TGTGTTG 2352 |||| || Sbjct 14516 TGTGGTG 14522 Score = 212 bits (234), Expect = 1e-51 Identities = 278/382 (73%), Gaps = 5/382 (1%) Strand=Plus/Plus Query 964 CACACTGAAAATGCTTTGTTGTTGTATATGGCATGTACTCATGCCTCAAATCCTGTGTAT 1023 || ||||||||||| ||||||| |||| | |||||||| || |||||||| ||| Sbjct 13084 CATACTGAAAATGCATTGTTGT---ATATTAGTTCAACTCATGCATCTAATCCTGTATAT 13140 Query 1024 GCTACTTTGAAGATTCGAATCTATTTTTACGATTC-GACTCAGAATTAATAAACATTAAA 1082 |||| ||| | || | |||||||| || | ||| |||||||||| ||| || Sbjct 13141 TGTACTATGAGAACACGCAGTTATTTTTATGAGAGTGTATCA-AATTAATAAATATTGAA 13199 Query 1083 TTTTATTTCATGATCTTCAATTACATCAATTGTCTGTTCTATTACATCGTTGAGTACATA 1142 |||||||||||||| ||||| |||||| | ||| || || ||||||| | | ||||| Sbjct 13200 TTTTATTTCATGATATTCAAGTACATCCACTGTTTGCTCAATTACATTGAATAATACATT 13259 Query 1143 ATTGAAAGCCCTAATACAATTGTTGATACTAATTACACCTAGACTATCTAAGTACTTCAG 1202 | | ||| |||||| |||||| |||||||| ||||||| | ||||| | |||| Sbjct 13260 GTCTACAGCTCTAATAATATTGTTAATACTAATAACACCTAATCGGTCTAAAAATTTCAT 13319 Query 1203 TACATGGGTTCTAAAAACCCTTAAGAAACGCCAGGTCTGAGGACGTAAGGCTGTGTAGAT 1262 |||| | | |||| || ||||||||| | ||| |||||||||| || ||| Sbjct 13320 TACACGAAATTTAAATACTCTTAAGAAAACGTATGTCGGAGGACGTAAACGAGTCCTGAT 13379 Query 1263 CTTCAAGTTCAGGAAGCACTTGTGAATCCCCAGTTGCTTCCTGAGGTTGTGGTTGAATCT 1322 ||| ||||| ||||| ||||||| ||||| |||||| |||||||||||||||| Sbjct 13380 CTTGAAGTTGAGGAAAGCTTTGTGAAGATTCAGTTCCTTCCTCAGGTTGTGGTTGAATCG 13439 Query 1323 GACTTGGACATGGATGATGTCG 1344 | ||| | | ||| |||||| Sbjct 13440 AATTTGTATTTCGATTATGTCG 13461 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 8704066273278