Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Solanum_20melongena_20[genbank_20GCA_5F000787875.1_202014-09-30] 33,873 sequences; 833,080,760 total letters Query= NC_010949.1 Length=2561 Score E Sequences producing significant alignments: (Bits) Value seq19028 161 2e-36 >seq19028 Length=31091 Score = 161 bits (178), Expect = 2e-36 Identities = 272/389 (70%), Gaps = 11/389 (3%) Strand=Plus/Plus Query 1427 GCATTATGCAGTGTCCACGTTTTTAAAGATATATTTTCATGTTTGTCTAGGAAGTCTTTA 1486 |||||||||| | ||| ||||||| ||||||| | | || ||||| |||||| Sbjct 13795 GCATTATGCAAAGACCAATTTTTTAATTTAATATTTTTTTCCTCCTCGAGGAACTCTTTA 13854 Query 1487 TAACTAGCCCCCTCTCCTGGATTGCAGAGCACGATTGATGGGATTCCTCCTTTAATTTGA 1546 || || | || |||||||| | | ||||| || || || || || || | Sbjct 13855 TAGCTGGAAGTAGGACCAGGATTGCACAAGAAGATTGTCGGTATCCCACCCTTTATCTTT 13914 Query 1547 ACTGGCTTCCCGTATTTGCAGTTGCTTTGCCAGTCACGTTGGGCCCCAATGAGCTCTTTC 1606 || ||| | |||||||| ||||| ||| | | ||||||||| || | |||||| Sbjct 13915 ACAGGCCTTCCGTATTTTACCTTGCTGGACCAATTGCTTTGGGCCCCCATAAACTCTTT- 13973 Query 1607 CAATGTTTTAGCTTTAGGTATTGCGGAGTGACATCATCAATGACGTTATA--ATGCACCT 1664 || || ||||||| || |||||| ||| | |||||||| |||||| | ||| | Sbjct 13974 -AAAGT----GCTTTAGATAATGCGGATCGACGTTATCAATGATGTTATACCAGGCA--T 14026 Query 1665 CATTTGAATAAACCCTAGAATTAAAATCTAGATGTCCACTCAGATAATTATGTGGGCCTA 1724 ||||||||||| || ||| ||||||| ||| || | || ||||||||||| |||| Sbjct 14027 TATTTGAATAAATTTTATTATTCAAATCTAAATGACCGCATAGGTAATTATGTGGTCCTA 14086 Query 1725 ATGCACGAGCCCACATCGTCTTTCCTGTACGACTATCACCCTCAATTATAATACTAATAG 1784 | | | |||||| ||||| ||||| | | ||||||||||| | |||||| | | Sbjct 14087 AAGATCTTGCCCACTCTGTCTTCCCTGTTCTAGACTCACCCTCAATGACAATACTCTTGG 14146 Query 1785 GTC-TCTCCGGCCGCGCAGCGGCACCCCT 1812 ||| | ||||||||||||||| |||| Sbjct 14147 GTCGTTAATGGCCGCGCAGCGGCATCCCT 14175 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 8083489699586